Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002612-TA|BGIBMGA002612-PA|undefined
(275 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065499-1|AAH65499.1| 1797|Homo sapiens microtubule associated ... 31 4.4
AL645480-1|CAH73244.1| 1798|Homo sapiens microtubule associated ... 31 4.4
AL603888-2|CAI16562.1| 1798|Homo sapiens microtubule associated ... 31 4.4
AL603882-2|CAI16217.1| 1798|Homo sapiens microtubule associated ... 31 4.4
AL358075-5|CAI21705.1| 1798|Homo sapiens microtubule associated ... 31 4.4
AB047005-1|BAB40778.1| 1734|Homo sapiens MAST205 protein. 31 4.4
AB018350-1|BAA34527.2| 1329|Homo sapiens KIAA0807 protein protein. 31 4.4
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 31 5.8
X07401-1|CAA30303.1| 285|Homo sapiens hU1-70K protein (286 AA) ... 31 5.8
X06814-1|CAA29963.1| 233|Homo sapiens protein ( Human mRNA for ... 31 5.8
X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for ... 31 5.8
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 31 5.8
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 31 5.8
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 31 5.8
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 31 5.8
AL117507-1|CAB55969.1| 341|Homo sapiens hypothetical protein pr... 31 5.8
>BC065499-1|AAH65499.1| 1797|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1797
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 124 PVTPAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEV 180
P + P R PLL+ + AE K + ++K L T + L+ PH+ +EL EV
Sbjct: 1390 PKSAEPPRSPLLKRVQSAE-KLAAALAASEKKLATSRKHSLDLPHSELKKELPPREV 1445
>AL645480-1|CAH73244.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 124 PVTPAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEV 180
P + P R PLL+ + AE K + ++K L T + L+ PH+ +EL EV
Sbjct: 1391 PKSAEPPRSPLLKRVQSAE-KLAAALAASEKKLATSRKHSLDLPHSELKKELPPREV 1446
>AL603888-2|CAI16562.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 124 PVTPAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEV 180
P + P R PLL+ + AE K + ++K L T + L+ PH+ +EL EV
Sbjct: 1391 PKSAEPPRSPLLKRVQSAE-KLAAALAASEKKLATSRKHSLDLPHSELKKELPPREV 1446
>AL603882-2|CAI16217.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 124 PVTPAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEV 180
P + P R PLL+ + AE K + ++K L T + L+ PH+ +EL EV
Sbjct: 1391 PKSAEPPRSPLLKRVQSAE-KLAAALAASEKKLATSRKHSLDLPHSELKKELPPREV 1446
>AL358075-5|CAI21705.1| 1798|Homo sapiens microtubule associated
serine/threonine kinase 2 protein.
Length = 1798
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 124 PVTPAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEV 180
P + P R PLL+ + AE K + ++K L T + L+ PH+ +EL EV
Sbjct: 1391 PKSAEPPRSPLLKRVQSAE-KLAAALAASEKKLATSRKHSLDLPHSELKKELPPREV 1446
>AB047005-1|BAB40778.1| 1734|Homo sapiens MAST205 protein.
Length = 1734
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 124 PVTPAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEV 180
P + P R PLL+ + AE K + ++K L T + L+ PH+ +EL EV
Sbjct: 1391 PKSAEPPRSPLLKRVQSAE-KLAAALAASEKKLATSRKHSLDLPHSELKKELPPREV 1446
>AB018350-1|BAA34527.2| 1329|Homo sapiens KIAA0807 protein protein.
Length = 1329
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 124 PVTPAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEV 180
P + P R PLL+ + AE K + ++K L T + L+ PH+ +EL EV
Sbjct: 922 PKSAEPPRSPLLKRVQSAE-KLAAALAASEKKLATSRKHSLDLPHSELKKELPPREV 977
>X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1)
ribonucleoprotein protein.
Length = 437
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 127 PAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEVEVPRRS 186
P P P + DR+ ER+ RE RE DK R R R R+ + E RRS
Sbjct: 223 PGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSRSRDRRRRSRSRDKEERRRS 277
Query: 187 PERT 190
ER+
Sbjct: 278 RERS 281
>X07401-1|CAA30303.1| 285|Homo sapiens hU1-70K protein (286 AA)
protein.
Length = 285
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 127 PAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEVEVPRRS 186
P P P + DR+ ER+ RE RE DK R R R R+ + E RRS
Sbjct: 71 PGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSRSRDRRRRSRSRDKEERRRS 125
Query: 187 PERT 190
ER+
Sbjct: 126 RERS 129
>X06814-1|CAA29963.1| 233|Homo sapiens protein ( Human mRNA for
hU1-70K small nuclear RNP protein (RNP12). ).
Length = 233
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 127 PAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEVEVPRRS 186
P P P + DR+ ER+ RE RE DK R R R R+ + E RRS
Sbjct: 38 PGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSRSRDRRRRSRSRDKEERRRS 92
Query: 187 PERT 190
ER+
Sbjct: 93 RERS 96
>X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for
hU1-70K snRNP protein (RNP8). ).
Length = 301
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 127 PAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEVEVPRRS 186
P P P + DR+ ER+ RE RE DK R R R R+ + E RRS
Sbjct: 174 PGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSRSRDRRRRSRSRDKEERRRS 228
Query: 187 PERT 190
ER+
Sbjct: 229 RERS 232
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 127 PAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEVEVPRRS 186
P P P + DR+ ER+ RE RE DK R R R R+ + E RRS
Sbjct: 400 PGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSRSRDRRRRSRSRDKEERRRS 454
Query: 187 PERT 190
ER+
Sbjct: 455 RERS 458
>M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen
protein.
Length = 437
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 127 PAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEVEVPRRS 186
P P P + DR+ ER+ RE RE DK R R R R+ + E RRS
Sbjct: 223 PGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSRSRDRRRRSRSRDKEERRRS 277
Query: 187 PERT 190
ER+
Sbjct: 278 RERS 281
>M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small
nuclear ribonucleoprotein 70 kd protein mRNA, complete
cds. ).
Length = 437
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 127 PAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEVEVPRRS 186
P P P + DR+ ER+ RE RE DK R R R R+ + E RRS
Sbjct: 223 PGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSRSRDRRRRSRSRDKEERRRS 277
Query: 187 PERT 190
ER+
Sbjct: 278 RERS 281
>BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear
ribonucleoprotein 70kDa polypeptide (RNP antigen)
protein.
Length = 437
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 127 PAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEVEVPRRS 186
P P P + DR+ ER+ RE RE DK R R R R+ + E RRS
Sbjct: 223 PGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSRSRDRRRRSRSRDKEERRRS 277
Query: 187 PERT 190
ER+
Sbjct: 278 RERS 281
>AL117507-1|CAB55969.1| 341|Homo sapiens hypothetical protein
protein.
Length = 341
Score = 30.7 bits (66), Expect = 5.8
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 127 PAPVRDPLLEADREAERKYRELIREADKLLVTVSRAPLEPPHNPRVRELRATEVEVPRRS 186
P P P + DR+ ER+ RE RE DK R R R R+ + E RRS
Sbjct: 127 PGPSPLPHRDRDRDRERERRERSRERDK-----ERERRRSRSRDRRRRSRSRDKEERRRS 181
Query: 187 PERT 190
ER+
Sbjct: 182 RERS 185
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.316 0.132 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,438,696
Number of Sequences: 224733
Number of extensions: 602276
Number of successful extensions: 1984
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1959
Number of HSP's gapped (non-prelim): 25
length of query: 275
length of database: 73,234,838
effective HSP length: 89
effective length of query: 186
effective length of database: 53,233,601
effective search space: 9901449786
effective search space used: 9901449786
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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