GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002611-TA|BGIBMGA002611-PA|IPR013026|Tetratricopeptide
region, IPR003347|Transcription factor jumonji/aspartyl
beta-hydroxylase, IPR007087|Zinc finger, C2H2-type,
IPR001440|Tetratricopeptide TPR_1, IPR013129|Transcription factor
jumonji
         (859 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.90 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   2.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   8.4  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    25   8.4  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 28.3 bits (60), Expect = 0.90
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 94  LGRCFAAQGKVHDAFIAYRNSVEKSEGNADTWCSIGVLYQQQNQPMDALQAY 145
           +G   A +G + +A   +    E +    D W +I  +Y +Q Q + A+Q Y
Sbjct: 652 IGAVLAHKGCIIEARDIFAQVREATADFCDVWINIAHIYVEQKQYISAIQMY 703


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 13/38 (34%), Positives = 16/38 (42%)

Query: 243  PPPYPGKRDELSQHQLHTLHYLQKNSHNLTPQQQVTKQ 280
            P P PG   E+   QLH     Q+       QQQ  +Q
Sbjct: 1281 PLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQ 1318


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 79  RAVAAEPESGAGLYLLGRCFAAQGKVHDAFIAYRNSVEKSEGNA 122
           R +A++P     +   GR F        + + Y  + +K EG+A
Sbjct: 234 RILASKPAETIKIDTSGRAFDRMSSTRKSLVCYTTTRQKKEGDA 277


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.0 bits (52), Expect = 8.4
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 79  RAVAAEPESGAGLYLLGRCFAAQGKVHDAFIAYRNSVEKSEGNA 122
           R +A++P     +   GR F        + + Y  + +K EG+A
Sbjct: 235 RILASKPAETIKIDTSGRAFDRMSSTRKSLVCYTTTRQKKEGDA 278


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.134    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,197
Number of Sequences: 2123
Number of extensions: 36936
Number of successful extensions: 105
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99
Number of HSP's gapped (non-prelim): 6
length of query: 859
length of database: 516,269
effective HSP length: 70
effective length of query: 789
effective length of database: 367,659
effective search space: 290082951
effective search space used: 290082951
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)