Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002610-TA|BGIBMGA002610-PA|undefined
         (114 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.17 
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   1.2  
DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex det...    21   4.8  
DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex det...    21   4.8  
DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex det...    21   4.8  
DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex det...    21   4.8  
DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex det...    21   4.8  
DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex det...    21   4.8  
DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex det...    21   4.8  
AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex det...    21   4.8  
AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex det...    21   4.8  
AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex det...    21   4.8  
AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex det...    21   4.8  
AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex det...    21   4.8  
AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex det...    21   4.8  
AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex det...    21   4.8  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   4.8  

>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.17
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)

Query: 20  YNKIVITDDGS-TIVALHQDYDFP 42
           YN++V+++DGS T     Q Y FP
Sbjct: 576 YNRLVVSEDGSETFKYSSQPYGFP 599


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T H+ Y R+R+++ K  +  R Y
Sbjct: 267 TSHKRYSRSREREQKSYKNEREY 289


>DQ325067-1|ABD14081.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 34  TSRRRYSRSREREQKSYKNEREY 56


>DQ325066-1|ABD14080.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 34  TSRRRYSRSREREQKSYKNEREY 56


>DQ325065-1|ABD14079.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 34  TSRRRYSRSREREQKSYKNEREY 56


>DQ325064-1|ABD14078.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 34  TSRRRYSRSREREQKSYKNEREY 56


>DQ325063-1|ABD14077.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 34  TSRRRYSRSREREQKSYKNEREY 56


>DQ325062-1|ABD14076.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 34  TSRRRYSRSREREQKSYKNEREY 56


>DQ325061-1|ABD14075.1|  152|Apis mellifera complementary sex
           determiner protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 34  TSRRRYSRSREREQKSYKNEREY 56


>AY569719-1|AAS86672.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 283 TSRRRYSRSREREQKSYKNEREY 305


>AY569718-1|AAS86671.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 283 TSRRRYSRSREREQKSYKNEREY 305


>AY569715-1|AAS86668.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 283 TSRRRYSRSREREQKSYKNEREY 305


>AY569714-1|AAS86667.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 283 TSRRRYSRSREREQKSYKNEREY 305


>AY569713-1|AAS86666.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 283 TSRRRYSRSREREQKSYKNEREY 305


>AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 283 TSRRRYSRSREREQKSYKNEREY 305


>AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 282 TSRRRYSRSREREQKSYKNEREY 304


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 91  TEHRWYPRARDKKAKKTEMNRPY 113
           T  R Y R+R+++ K  +  R Y
Sbjct: 283 TSRRRYSRSREREQKSYKNEREY 305


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.132    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,340
Number of Sequences: 429
Number of extensions: 1164
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of query: 114
length of database: 140,377
effective HSP length: 50
effective length of query: 64
effective length of database: 118,927
effective search space:  7611328
effective search space used:  7611328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)