Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002610-TA|BGIBMGA002610-PA|undefined
(114 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 30 0.50
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250... 29 0.67
01_06_1016 + 33830751-33831387,33831470-33831527,33831620-338317... 29 0.67
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 1.2
04_04_0158 - 23187070-23187264,23187347-23187477,23187550-231877... 28 1.5
11_03_0127 - 10408628-10409106,10409188-10409821 27 3.6
03_05_1111 - 30479793-30479823,30479887-30479978,30480261-304804... 27 3.6
03_01_0381 - 2960533-2960805 27 3.6
02_05_0497 - 29502012-29502101,29502128-29502197,29502302-295024... 27 3.6
01_05_0808 - 25414486-25414677,25415114-25415290,25415839-254159... 27 3.6
02_05_0205 + 26755024-26756217 27 4.7
12_02_1192 - 26884474-26885266,26885430-26885895,26886333-26886561 26 6.2
12_01_0042 + 337131-337612,338727-338898,338996-339204,339414-33... 26 6.2
11_01_0043 + 328272-328753,329233-329298,330082-330253,330357-33... 26 6.2
03_04_0011 + 16398093-16398170,16401321-16401806,16401892-164023... 26 6.2
01_03_0043 - 11919597-11920364 26 6.2
07_03_0151 - 14465479-14465675,14466280-14466401,14466934-144670... 26 8.2
06_03_1377 - 29692895-29692899,29700435-29702190 26 8.2
02_03_0276 - 17209623-17209654,17209806-17210244 26 8.2
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 26 8.2
>02_05_0702 -
31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 29.9 bits (64), Expect = 0.50
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 23 IVITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARK 82
+++ +GS V+ + Y+ E +++L EE +K T L + K V ++ EFAR+
Sbjct: 712 LMVLFEGSQEVS-RKAYEQVSERAKSLDEELTKLRTELLSLRSERDKAV---LEAEFARE 767
Query: 83 QLSNLTLTTEHR 94
+L+ T EH+
Sbjct: 768 RLNGFTAELEHQ 779
>09_01_0175 -
2509014-2509064,2509389-2509490,2509603-2509729,
2509852-2511564,2512335-2512424,2512533-2512801,
2513118-2513687,2513703-2514065
Length = 1094
Score = 29.5 bits (63), Expect = 0.67
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 46 SRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTE 92
S+ E+ D TVLK D DE+ FN+M + R+ S L TE
Sbjct: 598 SKGSNEDIFIDPTVLKHMDRDELVAHFNKMMNQMKRQHDSTLQEKTE 644
>01_06_1016 +
33830751-33831387,33831470-33831527,33831620-33831703,
33831819-33831954,33833191-33833451
Length = 391
Score = 29.5 bits (63), Expect = 0.67
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 43 YEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEH 93
Y++SR +P +TSK ++ K D V+R F + P + + LT +H
Sbjct: 330 YKYSRKIPVKTSKSESISK----DMVRRGFRFVGPTVIHSFMQAVGLTNDH 376
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 25 ITDDGSTIVALH---QDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPE 78
I +DG+ + H +D + P + S A+ EET+++ +L D+V+ E++PE
Sbjct: 1115 IQNDGAELTKEHDGVKDEEIPDQSSGAIVEETAQEANLLASEPTDDVQ--VKELEPE 1169
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 25 ITDDGSTIVALHQDY---DFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFAR 81
I +DG+ + H + P + S A+ EET+++ ++ +D+V+ +++PE
Sbjct: 945 IQNDGAELTEQHDSVKAEELPNQSSGAIVEETAQEADLVAGEPIDDVQE--KDLEPEEIS 1002
Query: 82 KQLSNLTLTTEHRWYPRARDKKAKKTE 108
+ T H+ + D + E
Sbjct: 1003 NTVDGETGEASHQTHAAVEDNWTGEVE 1029
>04_04_0158 -
23187070-23187264,23187347-23187477,23187550-23187763,
23187834-23187932,23188034-23188156,23188247-23188366,
23188447-23188506,23188592-23188884,23189554-23189707,
23189813-23190130,23190668-23190798,23191001-23191586,
23192125-23192739
Length = 1012
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 16 LSRFYNKIVITDDGSTIVALH-QDYDFPYEHSRALPEETSKDNTVLKMTDLD 66
L R +VI GSTI+ DY +PY H R + + + + D D
Sbjct: 204 LERKTGGLVIWRSGSTIILYRGTDYKYPYFHDREMKNDMDESSEHTSSDDED 255
>11_03_0127 - 10408628-10409106,10409188-10409821
Length = 370
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 31 TIVALHQDYDFPYEHSRALPEETSKD---NTVLKMTDLDEVKRVFNEMKPEFARKQLSNL 87
T V DY FP H LPE +D L+++ + + V E R++ SN
Sbjct: 45 TRVPSESDYRFPTRHRHDLPETAMQDAAREAFLRLSSIHRAELVSTEFAHHLFREE-SNS 103
Query: 88 TLTTE 92
T +
Sbjct: 104 VCTVQ 108
>03_05_1111 -
30479793-30479823,30479887-30479978,30480261-30480410,
30482229-30482354,30482563-30482628,30483134-30483214,
30483310-30483422,30483553-30483721,30484253-30484330,
30485489-30485752,30486239-30486379,30486548-30486759,
30486819-30486940,30487281-30487398,30487925-30487997
Length = 611
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 89 LTTEHRWYPRARDKK 103
LT H WYP AR+KK
Sbjct: 63 LTHPHIWYPNAREKK 77
>03_01_0381 - 2960533-2960805
Length = 90
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 69 KRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 105
K + E + F + ++N+T T E +W + R +K +
Sbjct: 27 KELEKEFERAFEQSDIANVTKTLEEKWAEQVRKRKLR 63
>02_05_0497 -
29502012-29502101,29502128-29502197,29502302-29502411,
29502530-29502641,29503341-29503498,29503592-29503807,
29504127-29504354,29504722-29504801,29504886-29505056,
29505179-29505281,29505369-29505551,29506313-29506813,
29506935-29507100,29507517-29507566,29508047-29508127,
29508291-29508398,29508874-29508939,29509053-29509109,
29509442-29509507,29509917-29510006,29510850-29510975,
29511681-29511717,29512192-29512250,29512562-29512615,
29513294-29513428,29513542-29513612,29513720-29513957
Length = 1141
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 26 TDDGSTIVALHQDYDFPYEHSRA-LPEETSKDNTVLKMTDLDEVK 69
TDD + H D E R + EE + + T+ DLDE+K
Sbjct: 553 TDDEINVDGSHSSEDSLVEKKRRRVDEEIAAEGTISSSGDLDEIK 597
>01_05_0808 - 25414486-25414677,25415114-25415290,25415839-25415928,
25416016-25416081,25416170-25416240,25416375-25416450,
25416567-25420098,25421464-25421834
Length = 1524
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 44 EHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKK 103
E + E +KD ++ + +R F E + + R L +TL + R AR+K+
Sbjct: 1177 EEEKERERERAKDRLAVQRATKEAHERAFAEARAKAERIALERITLARQ-RASAEAREKE 1235
Query: 104 AKKT 107
K T
Sbjct: 1236 EKAT 1239
>02_05_0205 + 26755024-26756217
Length = 397
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 31 TIVALHQDYDFPYEHSRALPEETSKD 56
T V DY FP H R LPE +D
Sbjct: 45 TRVPSESDYRFPTRHRRDLPETAMQD 70
>12_02_1192 - 26884474-26885266,26885430-26885895,26886333-26886561
Length = 495
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 9 ALIPRVALSRFYNKI-VITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDE 67
+++P +++ Y ++ VI +D + A + D + + RALPE+ T+L +D+
Sbjct: 109 SMLPHESVNDMYGRLNVIVNDLKGLGATYTDLEVAQKMLRALPEKYETLVTMLINSDMSR 168
Query: 68 V 68
+
Sbjct: 169 M 169
>12_01_0042 +
337131-337612,338727-338898,338996-339204,339414-339572,
339914-340262
Length = 456
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 65 LDEVKRVFNEMKPEFARKQLSNLTLTTEHR 94
+D+ K +F ++P+ Q+ N+T +E+R
Sbjct: 375 MDKAKEIFGTLEPKGIHVQILNITQLSEYR 404
>11_01_0043 +
328272-328753,329233-329298,330082-330253,330357-330565,
330779-330937,331279-331627
Length = 478
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 65 LDEVKRVFNEMKPEFARKQLSNLTLTTEHR 94
+D+ K +F ++P+ Q+ N+T +E+R
Sbjct: 397 MDKAKEIFGTLEPKGIHVQILNITQLSEYR 426
>03_04_0011 +
16398093-16398170,16401321-16401806,16401892-16402380,
16402810-16403466
Length = 569
Score = 26.2 bits (55), Expect = 6.2
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 7 KIALIPRVALSRFYNKIVITDDGSTIVALH--QDYDFPYEHSRALPEE--TSKDNTVLK 61
K+ IP + + + V T+DG +V +H + Y F E L E+ +KDN ++
Sbjct: 112 KVRGIPHLVILNATSGEVYTEDGVELVTVHGTEAYPFTTERINELKEQEKAAKDNQTVQ 170
>01_03_0043 - 11919597-11920364
Length = 255
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/62 (24%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 9 ALIPRVALSRFYNKI-VITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDE 67
+++P +++ Y ++ VI +D + + D + + RALPE+ T+L +D+
Sbjct: 121 SMLPHESVNDMYGRLNVIVNDLKGLGVNYTDLEIAQKMLRALPEKYETLVTMLINSDMSR 180
Query: 68 VK 69
+K
Sbjct: 181 MK 182
>07_03_0151 -
14465479-14465675,14466280-14466401,14466934-14467081,
14467146-14467167,14467299-14467393,14467395-14467438,
14467750-14467841,14467911-14467982,14468188-14468229,
14468333-14468494,14468631-14468683,14468808-14468925,
14468974-14469150,14469573-14469639,14470195-14470273,
14473805-14473862,14474257-14474346,14474429-14474540,
14474649-14474912,14475361-14475463,14476200-14476278,
14476748-14476852
Length = 766
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 17 SRFYNKIVITDDGSTIVALHQDYDFPYEHSRALPEETSK 55
++F + I++T DG+ I+ +H + P++ ++ T K
Sbjct: 640 AQFEHTILVTGDGAEILTMHPRPNCPFKETKNPYSHTQK 678
>06_03_1377 - 29692895-29692899,29700435-29702190
Length = 586
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 9 ALIPRVALSRFYNKI-VITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDE 67
+++P +++ Y ++ VI +D + A + D + + RALPE+ T+L +D+
Sbjct: 121 SMLPHESVNDMYGRLNVIVNDLKRLGANYTDLEVAQKMLRALPEKYETLVTMLINSDMSR 180
Query: 68 V 68
+
Sbjct: 181 M 181
>02_03_0276 - 17209623-17209654,17209806-17210244
Length = 156
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 31 TIVALHQDYDFPYEHSRALPEETSKD 56
T V DY FP H R LPE +D
Sbjct: 45 TRVPSELDYSFPTRHRRDLPEIAMQD 70
>01_06_1123 +
34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 2 SYLTRKIALIPRVALSRFYNKIVITDDGSTIVALHQDYDFP 42
S + RK+A + A R+ NK+ DD + + +L D DFP
Sbjct: 340 SEIERKLAENDQKA-ERWLNKVSQLDDSADLSSLAADEDFP 379
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.132 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,035,468
Number of Sequences: 37544
Number of extensions: 105302
Number of successful extensions: 314
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 305
Number of HSP's gapped (non-prelim): 21
length of query: 114
length of database: 14,793,348
effective HSP length: 73
effective length of query: 41
effective length of database: 12,052,636
effective search space: 494158076
effective search space used: 494158076
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)
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