Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002610-TA|BGIBMGA002610-PA|undefined
(114 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical pr... 41 2e-04
Z68270-8|CAC35869.1| 309|Caenorhabditis elegans Hypothetical pr... 41 2e-04
Z68270-7|CAA92571.2| 109|Caenorhabditis elegans Hypothetical pr... 41 2e-04
AF202930-1|AAK69380.1| 109|Caenorhabditis elegans Ny protein. 41 2e-04
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 31 0.26
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 31 0.26
Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical pr... 30 0.45
Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical pr... 30 0.45
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 30 0.45
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 30 0.45
Z66495-3|CAA91270.2| 484|Caenorhabditis elegans Hypothetical pr... 29 0.60
AF067215-5|AAC17010.3| 441|Caenorhabditis elegans T box family ... 28 1.4
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z83127-6|CAB05633.1| 327|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z80214-6|CAB02266.1| 327|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical pr... 27 4.2
U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin fam... 27 4.2
DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin f... 27 4.2
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 26 5.6
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 26 5.6
AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family ... 26 5.6
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 26 7.4
AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical ... 26 7.4
AL117204-39|CAL49444.1| 982|Caenorhabditis elegans Hypothetical... 26 7.4
Z81069-2|CAB02992.1| 310|Caenorhabditis elegans Hypothetical pr... 25 9.8
>Z68270-9|CAE54911.1| 307|Caenorhabditis elegans Hypothetical
protein ZC410.7c protein.
Length = 307
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 13 RVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 70
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 71 VFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 105
+ + E +L ++ T++H WY R R+++ +
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLR 99
>Z68270-8|CAC35869.1| 309|Caenorhabditis elegans Hypothetical
protein ZC410.7b protein.
Length = 309
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 13 RVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 70
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 71 VFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 105
+ + E +L ++ T++H WY R R+++ +
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLR 99
>Z68270-7|CAA92571.2| 109|Caenorhabditis elegans Hypothetical
protein ZC410.7a protein.
Length = 109
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 13 RVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 70
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 71 VFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 105
+ + E +L ++ T++H WY R R+++ +
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLR 99
>AF202930-1|AAK69380.1| 109|Caenorhabditis elegans Ny protein.
Length = 109
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 8/95 (8%)
Query: 13 RVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRA--LPEETSKDNTVLKMTDLDEVKR 70
R A S K+V+ +G TI A H FPYEH++ L T KD + + L +
Sbjct: 11 RFASSDSPRKVVVCANG-TIAAWHPPQHFPYEHTKPIDLGSLTKKDQS----SRLSAAAK 65
Query: 71 VFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 105
+ + E +L ++ T++H WY R R+++ +
Sbjct: 66 A-SSIPREPVNAELKDIFYTSKHEWYSRTREERLR 99
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 30.7 bits (66), Expect = 0.26
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 35 LHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHR 94
+ +DYD YE + + +D +LK E + F E K ++ T ++R
Sbjct: 390 IKEDYDELYEKLKRDQRDLERDQKILK-KGTGERNKEFTETIATLRDKLRASETKNAQYR 448
Query: 95 WYPRARDKKAKKTE 108
R RD+K KK +
Sbjct: 449 QDIRVRDEKLKKKD 462
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 30.7 bits (66), Expect = 0.26
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Query: 35 LHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHR 94
+ +DYD YE + + +D +LK E + F E K ++ T ++R
Sbjct: 390 IKEDYDELYEKLKRDQRDLERDQKILK-KGTGERNKEFTETIATLRDKLRASETKNAQYR 448
Query: 95 WYPRARDKKAKKTE 108
R RD+K KK +
Sbjct: 449 QDIRVRDEKLKKKD 462
>Z73103-9|CAJ43433.1| 719|Caenorhabditis elegans Hypothetical
protein C08F8.2b protein.
Length = 719
Score = 29.9 bits (64), Expect = 0.45
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 54 SKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 105
+KD +L LD K+VF ++ + +S+LT H WYP AR K
Sbjct: 139 TKDCEMLYPFFLDHAKQVFPHLEAMDDLRIISDLT--RPHNWYPEARSVTRK 188
>Z73103-8|CAA97429.1| 721|Caenorhabditis elegans Hypothetical
protein C08F8.2a protein.
Length = 721
Score = 29.9 bits (64), Expect = 0.45
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 54 SKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRARDKKAK 105
+KD +L LD K+VF ++ + +S+LT H WYP AR K
Sbjct: 141 TKDCEMLYPFFLDHAKQVFPHLEAMDDLRIISDLT--RPHNWYPEARSVTRK 190
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 29.9 bits (64), Expect = 0.45
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 10 LIPRVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVK 69
LI L YNK+ + +G + Q + LPE LK+ DL E +
Sbjct: 315 LIQLTVLHLSYNKLELVPEGISRCVKLQKLKLDHNRLITLPEGIHLLPD-LKVLDLHENE 373
Query: 70 RVFNEMKPEFARKQLS--NLTLTTEHR 94
+ KP ARK+L+ N+ + EH+
Sbjct: 374 NLVMPPKPNDARKKLAFYNIDFSLEHQ 400
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 29.9 bits (64), Expect = 0.45
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 10 LIPRVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVK 69
LI L YNK+ + +G + Q + LPE LK+ DL E +
Sbjct: 315 LIQLTVLHLSYNKLELVPEGISRCVKLQKLKLDHNRLITLPEGIHLLPD-LKVLDLHENE 373
Query: 70 RVFNEMKPEFARKQLS--NLTLTTEHR 94
+ KP ARK+L+ N+ + EH+
Sbjct: 374 NLVMPPKPNDARKKLAFYNIDFSLEHQ 400
>Z66495-3|CAA91270.2| 484|Caenorhabditis elegans Hypothetical
protein C36A4.4 protein.
Length = 484
Score = 29.5 bits (63), Expect = 0.60
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 55 KDNTVLKMTDLDEVKRVFNEMKPEFARK---QLSNLTLTTEHRWYPRARDKKAKKT 107
KD + K + + +NE+ K Q+S L L+ H+W+ + D++A T
Sbjct: 8 KDEIISKFPGSEPLLNFYNELSDAEKSKLFHQISTLNLSEAHQWFIDSADQRAPST 63
>AF067215-5|AAC17010.3| 441|Caenorhabditis elegans T box family
protein 32 protein.
Length = 441
Score = 28.3 bits (60), Expect = 1.4
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 1 MSYLTRKIALIPRVALSRFYNKIVITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVL 60
M ++ I L S+ N S+ AL+QD F E S + ++ + +N
Sbjct: 314 MDQQSKSIDLNQTTWTSQSINNQSYLSTASSPAALNQD-SFASEKSSIVRDKKNDENC-- 370
Query: 61 KMTDLDEVKRVFNEMKPEF--ARKQLSNLTLTTEHRWYPRARDKKAKKTEMN 110
LDE RVFNE+ +F QL +L+ T W + + ++N
Sbjct: 371 ----LDEFDRVFNELDQQFTPTENQLQDLSNCT--TWNQEPINNSIQSNQLN 416
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 41 FPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHR 94
F Y R P S NT+LK D K +F E+ PE+ + + EHR
Sbjct: 197 FKYALQRKFPLYLSTKNTILKKYD-GRFKDIFAEIYPEY-EAEFKAAGIWYEHR 248
>Z83127-6|CAB05633.1| 327|Caenorhabditis elegans Hypothetical
protein C27D8.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 38 DYDFPYEHSRALPEETSKDNTVLKM 62
D D PY+ PE+TSK+ T KM
Sbjct: 302 DIDSPYDWELQKPEKTSKEPTSSKM 326
>Z80214-6|CAB02266.1| 327|Caenorhabditis elegans Hypothetical
protein C27D8.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 38 DYDFPYEHSRALPEETSKDNTVLKM 62
D D PY+ PE+TSK+ T KM
Sbjct: 302 DIDSPYDWELQKPEKTSKEPTSSKM 326
>Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical
protein R04F11.3 protein.
Length = 385
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 49 LPEETSKDNTVLKMTDLDEVKRVFNEMKP--EFARKQLSNLTLTTEHRWYPRARDKKAKK 106
+P++ K N M ++DE + + KP + K+ L ++ + +P +R++ +K
Sbjct: 202 VPQDQEKKNRKRPMIEVDESEELIKATKPKEKTPEKKPEKLIISQDSDEFPSSREQSVEK 261
>U53332-2|AAK31532.1| 473|Caenorhabditis elegans Tetraspanin family
protein 18 protein.
Length = 473
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 53 TSKDNTVLKMTDLDEVKRVFNE--MKPEFARKQLSNLTLTTEHRWYPRARDKKAKKTE 108
TS+D+ VL D++ + E MK E K L +TE + P K KKT+
Sbjct: 393 TSRDDGVLSSDSNDKLTKKSTEHPMKKEKQTKNKVQLRKSTETKQKPNVVAKPQKKTD 450
>DQ178635-1|ABD75714.1| 361|Caenorhabditis elegans tetraspanin
family protein protein.
Length = 361
Score = 26.6 bits (56), Expect = 4.2
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 53 TSKDNTVLKMTDLDEVKRVFNE--MKPEFARKQLSNLTLTTEHRWYPRARDKKAKKTE 108
TS+D+ VL D++ + E MK E K L +TE + P K KKT+
Sbjct: 281 TSRDDGVLSSDSNDKLTKKSTEHPMKKEKQTKNKVQLRKSTETKQKPNVVAKPQKKTD 338
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 40 DFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRA 99
+F + +P D T+ LDE + P +Q + T EH+W R
Sbjct: 3882 EFRCNDGKCIPGSKVCDGTIQCSDGLDESQCTLRRCLP--GHRQCDDGTCIAEHKWCDRK 3939
Query: 100 RD 101
+D
Sbjct: 3940 KD 3941
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 26.2 bits (55), Expect = 5.6
Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Query: 40 DFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRA 99
+F + +P D T+ LDE + P +Q + T EH+W R
Sbjct: 3882 EFRCNDGKCIPGSKVCDGTIQCSDGLDESQCTLRRCLP--GHRQCDDGTCIAEHKWCDRK 3939
Query: 100 RD 101
+D
Sbjct: 3940 KD 3941
>AF098986-1|AAC67425.1| 747|Caenorhabditis elegans T box family
protein 31 protein.
Length = 747
Score = 26.2 bits (55), Expect = 5.6
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 30 STIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTL 89
S+ AL+QD E S + ++ S +N LDE RVFNE+ +F K+ L
Sbjct: 343 SSPAALNQDSSAS-EKSSIVRDKKSDENC------LDEFDRVFNELDQQFTPKEDQVQDL 395
Query: 90 TTEHRWYPRARDKKAKKTEMNRPYL 114
+ W + + + P L
Sbjct: 396 SNCTTWNQEPINNSIQSNQFINPEL 420
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 25.8 bits (54), Expect = 7.4
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 25 ITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQL 84
+ +D + + + Y FPY + P ++D T++ L + V + P L
Sbjct: 1783 VYEDKNLTLITERWYSFPYNYRPFRPYRITRDVTIMPGATLYIEQNVEVHVWPNVRILVL 1842
Query: 85 SNLTLTTEHRWYPRARDKKAKKTE 108
NL E+ W P R K TE
Sbjct: 1843 GNLVARGEY-WQP-IRFKPINVTE 1864
>AL132895-1|CAC14399.1| 601|Caenorhabditis elegans Hypothetical
protein Y59A8A.1 protein.
Length = 601
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 63 TDLDEVKRVFNEMKPEFARKQLSNLTL 89
TD+ FNE++ E ARK+ N L
Sbjct: 129 TDITHYVAFFNELESELARKEFKNRQL 155
>AL117204-39|CAL49444.1| 982|Caenorhabditis elegans Hypothetical
protein Y116A8C.16c protein.
Length = 982
Score = 25.8 bits (54), Expect = 7.4
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 49 LPEETSKDNTVLKMTDLDEVKRVFNEMKPEFARKQLSNLTLTTEHRWYPRAR 100
+PEETS + + +M D+DE + EM P + + + + R P AR
Sbjct: 66 IPEETSFEVEIEEMGDIDEAQG--GEMDPSAMSRMTAKVRKKSSIRVPPLAR 115
>Z81069-2|CAB02992.1| 310|Caenorhabditis elegans Hypothetical
protein F25H9.2 protein.
Length = 310
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/62 (22%), Positives = 28/62 (45%)
Query: 22 KIVITDDGSTIVALHQDYDFPYEHSRALPEETSKDNTVLKMTDLDEVKRVFNEMKPEFAR 81
+++ D+ + L DF YE + + + D L ++DE ++K E AR
Sbjct: 171 ELLFPDEDHDVNELQLSNDFEYEPTLRIVKVFYNDGDALTGDNVDETLEYATKLKSENAR 230
Query: 82 KQ 83
++
Sbjct: 231 QR 232
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.132 0.379
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,764,531
Number of Sequences: 27539
Number of extensions: 104968
Number of successful extensions: 350
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 336
Number of HSP's gapped (non-prelim): 25
length of query: 114
length of database: 12,573,161
effective HSP length: 72
effective length of query: 42
effective length of database: 10,590,353
effective search space: 444794826
effective search space used: 444794826
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
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