GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002608-TA|BGIBMGA002608-PA|undefined
         (79 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   6.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory
          receptor candidate 19 protein.
          Length = 355

 Score = 19.0 bits (37), Expect = 6.3
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 42 HLLGPVLAPHYRCHLLIYGRPFAFNCYELL 71
          HLL  + + ++  HLL Y     F  + LL
Sbjct: 69 HLLFLLCSGYFTVHLLFYCPFIIFTVHFLL 98



 Score = 18.6 bits (36), Expect = 8.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)

Query: 42  HLLGPVLAPHYRCHLLIYGRPFAFNC 67
           HLL  +   H+ C  +I+     F C
Sbjct: 159 HLLFLLCIYHFFCAFIIFTMHLLFCC 184


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.331    0.144    0.525 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,603
Number of Sequences: 317
Number of extensions: 391
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 79
length of database: 114,650
effective HSP length: 46
effective length of query: 33
effective length of database: 100,068
effective search space:  3302244
effective search space used:  3302244
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (20.0 bits)
S2: 36 (18.6 bits)