GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002608-TA|BGIBMGA002608-PA|undefined
         (79 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor ...    27   6.9  
X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.    27   6.9  
BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.         27   6.9  
BC024689-1|AAH24689.1|  517|Homo sapiens Similar to Elongation f...    27   6.9  
BC006547-1|AAH06547.1|  583|Homo sapiens EEF2 protein protein.         27   6.9  
AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2 pro...    27   6.9  

>Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor 2
           protein.
          Length = 858

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 42  HLLGPVLAPHYRCHLLIYGRP 62
           HL  PV A  YRC LL  G P
Sbjct: 357 HLPSPVTAQKYRCELLYEGPP 377


>X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.
          Length = 858

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 42  HLLGPVLAPHYRCHLLIYGRP 62
           HL  PV A  YRC LL  G P
Sbjct: 357 HLPSPVTAQKYRCELLYEGPP 377


>BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.
          Length = 858

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 42  HLLGPVLAPHYRCHLLIYGRP 62
           HL  PV A  YRC LL  G P
Sbjct: 357 HLPSPVTAQKYRCELLYEGPP 377


>BC024689-1|AAH24689.1|  517|Homo sapiens Similar to Elongation
          factor 2b protein.
          Length = 517

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 42 HLLGPVLAPHYRCHLLIYGRP 62
          HL  PV A  YRC LL  G P
Sbjct: 16 HLPSPVTAQKYRCELLYEGPP 36


>BC006547-1|AAH06547.1|  583|Homo sapiens EEF2 protein protein.
          Length = 583

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 42  HLLGPVLAPHYRCHLLIYGRP 62
           HL  PV A  YRC LL  G P
Sbjct: 357 HLPSPVTAQKYRCELLYEGPP 377


>AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2
           protein.
          Length = 858

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/21 (57%), Positives = 12/21 (57%)

Query: 42  HLLGPVLAPHYRCHLLIYGRP 62
           HL  PV A  YRC LL  G P
Sbjct: 357 HLPSPVTAQKYRCELLYEGPP 377


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.331    0.144    0.525 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,866,093
Number of Sequences: 224733
Number of extensions: 223534
Number of successful extensions: 354
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 348
Number of HSP's gapped (non-prelim): 6
length of query: 79
length of database: 73,234,838
effective HSP length: 58
effective length of query: 21
effective length of database: 60,200,324
effective search space: 1264206804
effective search space used: 1264206804
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 57 (27.1 bits)