Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002607-TA|BGIBMGA002607-PA|undefined
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94) 34 0.38
SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65) 33 0.66
SB_57248| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.87
SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91) 32 1.5
SB_40030| Best HMM Match : RVT_1 (HMM E-Value=0.0013) 32 2.0
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.0
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 32 2.0
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21) 31 3.5
SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.6
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 4.6
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 31 4.6
SB_6215| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.6
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.1
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.1
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.1
SB_40134| Best HMM Match : Calx-beta (HMM E-Value=0) 30 6.1
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 30 6.1
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 30 6.1
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 30 6.1
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 30 6.1
SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15) 30 8.1
SB_32293| Best HMM Match : BRCA2 (HMM E-Value=0) 30 8.1
SB_21130| Best HMM Match : Smg4_UPF3 (HMM E-Value=1.5) 30 8.1
SB_5444| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.1
>SB_6893| Best HMM Match : PPV_E2_C (HMM E-Value=0.94)
Length = 1058
Score = 34.3 bits (75), Expect = 0.38
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 226 LDMVNDRIEKLPKSSASDMAKKHMKGGLDA-KALAAIDSKGSRSTEEFKKKTQSTAQVND 284
+ +VN + + A KK +K LDA K +DS + S+EE K Q T+ +
Sbjct: 595 IKIVNSTTSSIAEKIAKQEEKKEIKSVLDALKCDETLDSDDNTSSEEGGKSKQQTSAETN 654
Query: 285 AAATSDRNSSNLNKT 299
+ S + +N+ T
Sbjct: 655 SVLVSGEDKANVQVT 669
>SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65)
Length = 1799
Score = 33.5 bits (73), Expect = 0.66
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 647 RLLHKREQNSDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKIN 706
R++ + + K H S P FY + + S+ SD + A L+ DD
Sbjct: 1586 RIIASQNSPAAKIRTSHNKEPNDSGPAWFYPVSNKHYSRPSDSESMIQPANLRRDD---Q 1642
Query: 707 QIKTFSAPFSTTSRNIGNTNAEDNSHWLPP 736
KTFS P + S ++ + ++ ++ P
Sbjct: 1643 TTKTFSPPAAAVSTSMQRLSLQEAFNFAKP 1672
>SB_57248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 33.1 bits (72), Expect = 0.87
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Query: 667 SESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQIKTFSAPFSTTSR--NIGN 724
++ S P+S +TPP+ + KT T N P + K N IK F + R N G
Sbjct: 178 ADGSKPESTWTPPNFHEDKTGGIVTTKKNKPKYRKEEKSN-IKGFKTDTQISDRKVNTGG 236
Query: 725 TNAEDNSHWLP 735
+ W P
Sbjct: 237 SKERVLQRWTP 247
>SB_57255| Best HMM Match : Atrophin-1 (HMM E-Value=0.91)
Length = 1249
Score = 32.3 bits (70), Expect = 1.5
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 656 SDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDERTA--ASNAPLKSDD 702
SD + A+ S+S D TPP+++V TSD++ AS+ P SDD
Sbjct: 758 SDDQVTPSASDVMSTSDDQV-TPPASDVMSTSDDQVTPPASDVPTTSDD 805
Score = 31.1 bits (67), Expect = 3.5
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 656 SDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQIKTFSAPF 715
SD + A+ ++S D TP +++V TSD++ +AS+ SDD Q+ S+
Sbjct: 595 SDDQVTPSASDVPTTSDDQV-TPSASDVPTTSDDQPSASDVKSTSDD----QVTPPSSDV 649
Query: 716 STTSRNIGNTNAED 729
TTS + +A D
Sbjct: 650 PTTSDDQVTPSASD 663
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 670 SSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQIKTFSAPFSTTSRN 721
++ D TP +++V TSD++ S + + S NQI F++ F+ TS N
Sbjct: 936 TAKDDHVTPSASDVPTTSDDQVTQSASDVTS--TSDNQITPFASDFTPTSDN 985
Score = 30.7 bits (66), Expect = 4.6
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 670 SSPDSFYTPPSTNVSKTSDERT--AASNAPLKSDDVKINQIKTFSAPFSTTSRNIGNTNA 727
++ D TPPS++V TSD++ ++S+ P SD NQ+ ++ TTS + +A
Sbjct: 518 ATSDDQVTPPSSDVPTTSDDQVTPSSSDVPTTSD----NQVTPSASDVPTTSDDQVTPSA 573
Query: 728 ED 729
D
Sbjct: 574 SD 575
Score = 30.7 bits (66), Expect = 4.6
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 656 SDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDER--TAASNAPLKSDDVKINQIKTFSA 713
SD + A+ S+S D TPP+++V TSD++ ++S+ P SDD Q+ ++
Sbjct: 773 SDDQVTPPASDVMSTSDDQV-TPPASDVPTTSDDQITPSSSDVPATSDD----QVTPPAS 827
Query: 714 PFSTTSRNIGNTNAED 729
T S N +A D
Sbjct: 828 DVPTASDNQVTPSASD 843
Score = 30.3 bits (65), Expect = 6.1
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 656 SDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDERT--AASNAPLKSDDVKINQIKTFSA 713
SD + A+ +S D TP S++V+ TSD++ +AS+ P SDD Q+ ++
Sbjct: 863 SDDQVTPSASDVTPTSDDQV-TPSSSDVTPTSDDQVTPSASDVPTASDD----QVTQSAS 917
Query: 714 PFSTTSRNIGNTNAED 729
T S N +A D
Sbjct: 918 NVPTASDNQVTPSASD 933
>SB_40030| Best HMM Match : RVT_1 (HMM E-Value=0.0013)
Length = 268
Score = 31.9 bits (69), Expect = 2.0
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 171 QDLLKGSHSGSIYNSTEIRNLGKVFYELSAFSLGTFEFRLSSATHFGGQHPSPVLLDMVN 230
+DL +IY++ + N F +LS S+ +F +L+ G +P LL + +
Sbjct: 16 EDLSSHPSLKNIYDANKSNNSNFCFQQLSTNSVQSFLEKLNVRKASGYDSITPRLLKLAS 75
Query: 231 DRIEKLPKSSASDMAKKHMKGGLDAKALAAIDSKGSRSTEEFK 273
R++K+ +S S H LD L+A K S T K
Sbjct: 76 -RVDKVYESMMSTQVNNHFDHKLD-PCLSAYRKKHSCETTLLK 116
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 31.9 bits (69), Expect = 2.0
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 653 EQNSDKSLVEHANTSESSSPDSFYTPP--STNVSKTSDERTAASNAPLKSDDVKINQIKT 710
E N +S ANT S + ++ YTPP +T + + T A+ P+++ + +T
Sbjct: 790 EANDRQSQTTEANTPPSQTTEA-YTPPAQTTEANTPPAQTTEANTPPVQTTESYNTPTET 848
Query: 711 FSAPFSTTSRNIGNT 725
+ P+ TS T
Sbjct: 849 TALPYQETSTESSTT 863
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 31.9 bits (69), Expect = 2.0
Identities = 35/179 (19%), Positives = 72/179 (40%), Gaps = 11/179 (6%)
Query: 246 KKHMKGGLDAKALAAIDSKGSR--STEEFKKKTQSTAQVNDAAAT---SDRNSSNLNKTP 300
K+ G + + ++ ++ K + E +K ++ N T SD+NSS + TP
Sbjct: 458 KQESNGNEEEERISKVEVKVEKVGEVEILEKNDKAILSGNSKTTTCNASDKNSSVITFTP 517
Query: 301 SRYDANVSSRIGSETDXXXXXXXXXXXXXXXXQSTDM---KPPMKVDKTVKESADTARLH 357
S + V + S++D +S ++ + K D + A T +
Sbjct: 518 SDEGSKVVPSVPSDSDSNVQSSKTVVSTVLEVESKNVSSTEESSKADVNITVGASTTNVS 577
Query: 358 KKFERKLS--VLVSKVTPPNMNDAMQGNVAIAEHIKDASDYLSESVTTPGEKTEALKIL 414
++ ++ +L K+ ++ + ++ DA+D S TP EK + L+ L
Sbjct: 578 TSSDKSVTSQLLEDKIGSALPTESDKNGKSVIVIASDANDKTVHS-PTPDEKIKELESL 635
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 31.5 bits (68), Expect = 2.7
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 650 HKREQNSDKSLVEHANTSESS--SPDSFYTPP--STNVSKTSDERTAASNAPLKSDDVKI 705
HK+E+ +K +H ESS PD TP S S D R + PL S D
Sbjct: 173 HKKEKKREKDKHKHKQEKESSDDKPDELSTPKKISEKGSPKGDGRERKQSHPLSSRDQTT 232
Query: 706 NQIK 709
Q K
Sbjct: 233 RQSK 236
>SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21)
Length = 157
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 275 KTQSTAQVNDAAATSDRNSSNLNKTP-SRYDANVSSRIGSET 315
++QST + D ATS+ +S L TP RY AN R ++T
Sbjct: 5 ESQSTDDIEDQGATSELDSPELADTPKKRYTANRKERKRTQT 46
>SB_35730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 30.7 bits (66), Expect = 4.6
Identities = 18/77 (23%), Positives = 40/77 (51%)
Query: 655 NSDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQIKTFSAP 714
NS S +N+S SSS S + S++ S +S +++S++ S + + S+
Sbjct: 60 NSSSSSSSSSNSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 119
Query: 715 FSTTSRNIGNTNAEDNS 731
S++S + ++++ +S
Sbjct: 120 SSSSSSSSSSSSSSSSS 136
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.7 bits (66), Expect = 4.6
Identities = 23/134 (17%), Positives = 41/134 (30%)
Query: 603 PSKLRPRFQDPITSDAVTDXXXXXXXXXXXXXXXXXXXXXXXRVRLLHKREQNSDKSLVE 662
PSK DP+T+ T + S +
Sbjct: 389 PSKATAPISDPMTTTTPTTTKATTPTTTKATASTQTAAEANTFLSTQKTDATTSQSTSTT 448
Query: 663 HANTSESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQIKTFSAPFSTTSRNI 722
A S+++ + + +T + TS T + L + K + S +TTS +
Sbjct: 449 EATKSQTTKATTTLSTSTTKATTTSSTSTTKATTTLSTSTTKATTTPSTSTTKATTSTAV 508
Query: 723 GNTNAEDNSHWLPP 736
T + + PP
Sbjct: 509 EATTSPAATETAPP 522
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 30.7 bits (66), Expect = 4.6
Identities = 14/64 (21%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 392 DASDYLSESVTTPGEKTEALKILIDHMDRIGNGVLLCHGNIRKTYTDGADKLRGKNTDQL 451
D +++LS T KT+ +++ MD+ G+G + G+++KT + + L + ++
Sbjct: 56 DRTEFLSMMCTVQSGKTQEIRMAFKSMDKDGDG-FITFGDLKKTMQECDENLSDDDLKRM 114
Query: 452 AVQS 455
+ +
Sbjct: 115 IIDA 118
>SB_6215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 30.7 bits (66), Expect = 4.6
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 231 DRIEKLPKSSASDMAKKHMKG--GLDAKALAAIDSKGSRSTEEFKKKTQSTAQVNDAAAT 288
D+I + K +D K + G + K+ + + SRS + K++S + +DA
Sbjct: 485 DKISENHKQQTNDENDKESRARRGTEGKSASDNEKDLSRSAKSKNTKSKSKKKEDDAVKP 544
Query: 289 SDRNSSNLNKTPSRYDANVSSRIGSETD 316
S S +NK+ + + S+ + TD
Sbjct: 545 SSSPKSPVNKSSANKGSTESNLVMKNTD 572
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 30.3 bits (65), Expect = 6.1
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 231 DRIEKLPKSSASDMAKKHMKGGL--DAKALAAIDSKGS---RSTEEFKKKTQSTAQVNDA 285
+R EK KK K G D +A DS+G R E+ K KT+ + +D+
Sbjct: 68 ERKEKETFEPEQKKKKKDKKAGKVRDDRARKGSDSEGGSDERKCEDRKDKTRKKKRKHDS 127
Query: 286 AATSDRNSSNLN 297
+ SD NSS+++
Sbjct: 128 SEDSDDNSSDVS 139
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 30.3 bits (65), Expect = 6.1
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Query: 63 QIETEMKRGVPAQVSPNIAAGLNDTMNDASKHLAKIGAEKGRALDYLVGLMKERGESPLG 122
+ ETE K+ A N+ D +D+++ L + K A+ GL+ SP G
Sbjct: 2048 KFETERKKHQRAASMTNLRRAAPDWKSDSTEDLRAQKSSKSIAMSRTAGLVSLAKSSPYG 2107
Query: 123 QMQ---GYLQTYSDGAKRIMKAPVGVTASDDESMKVAMHSKVTSVIPDKKMQDLL 174
++ GY + + +K + +A +TA D + SV K Q L+
Sbjct: 2108 SVELLGGYRRGHVPPSKSLFRASRILTA--DPRAAIVQMILAISVANSKAPQTLV 2160
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 30.3 bits (65), Expect = 6.1
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 649 LHKREQNSDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQI 708
+H NS+ + ++N++ +S+ +S S + S ++ + SN+ S+ N
Sbjct: 417 VHNSNSNSNSNSNSNSNSNSNSNSNSKSNSNSNSNSNSNSNSNSNSNSNSNSNS---NSN 473
Query: 709 KTFSAPFSTTSRNIGNTNAEDNSH 732
S+ S+ S + N+N+ NS+
Sbjct: 474 SNSSSSSSSNSNSNSNSNSNSNSN 497
>SB_40134| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 517
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 664 ANTSESSSPDSFYTPPST-NVSKTSDERTAASNAPLKSDDVKINQIKTFSAPFSTTSRNI 722
+ +++++SP + YT + V+ S+E T N + +DDVK+ + +TF A +T+ ++
Sbjct: 218 STSNDTASPLTDYTKINNLEVTFLSNETTKTVNVSI-TDDVKVEENETFYAHLTTSLSSV 276
Query: 723 GNTN 726
T+
Sbjct: 277 NITD 280
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 30.3 bits (65), Expect = 6.1
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 52 ESDPKCEDLKIQIETEMKRGVPAQVSPNIAAGLNDTMNDASKHLAKIGAEKGRALDYLVG 111
E+ + DL+++ E E+K V Q + ++ + L ++ E+ A+D L
Sbjct: 1426 EAQGRESDLEVRYEYEVKEKVALQQQLDDTTNRSNADREKFLKLEQLLIEERLAMDLLRK 1485
Query: 112 LMKERGESPLGQMQGYLQTYSDGAKRIMKAPVGVTASDDESMK 154
+ E+ E +GQ+Q + Y + + MK + ++ D E +K
Sbjct: 1486 ELSEK-EDSVGQLQAG-KAYLEEQLQSMKVSLVLSRDDSEKIK 1526
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 30.3 bits (65), Expect = 6.1
Identities = 18/82 (21%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 651 KREQNSDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQIKT 710
K + ++ + L + + S +S+ D+ + S + + SD+ ++ P S+ K+ + +
Sbjct: 54 KSDNSNSEKLNSNNSDSNNSNSDNSNSDNSNSDNSNSDKLKLVNSNPDNSNSDKLKLVNS 113
Query: 711 FSAPFSTTSRNIGNTNAEDNSH 732
S ++ + N N+N+ DNS+
Sbjct: 114 NSDKLNSDNSNSDNSNS-DNSN 134
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/102 (21%), Positives = 33/102 (32%)
Query: 258 LAAIDSKGSRSTEEFKKKTQSTAQVNDAAATSDRNSSNLNKTPSRYDANVSSRIGSETDX 317
LA + +G + T+ KKKT A A R K + + + +ETD
Sbjct: 359 LAKPEPEGKKGTKRGKKKTSKDATEESEAPNKKRKEKKKKKKKKKASSKIEPTETAETDD 418
Query: 318 XXXXXXXXXXXXXXXQSTDMKPPMKVDKTVKESADTARLHKK 359
+ D K D +TAR + K
Sbjct: 419 VTERAGLLLGNDAIDEDDDDDRDSKEDDAEDARQETARRNAK 460
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 30.3 bits (65), Expect = 6.1
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 655 NSDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQIKTFSAP 714
NSD S +++N S++SS D+ + S + TS+ ++ S+ NQ + S
Sbjct: 270 NSDNSNTDNSN-SDNSSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDD 328
Query: 715 FSTTSRNIGNTNAEDNSH 732
+ N N+N+ DNS+
Sbjct: 329 SKPDNSNTNNSNS-DNSN 345
Score = 29.9 bits (64), Expect = 8.1
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 655 NSDKSLVEHANTSESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQIKTFSAP 714
NSD S +++ TS++S+ D+ YT ST+ + D ++ S + ++
Sbjct: 214 NSDNSTSDNS-TSDNSNSDNSYTDNSTSDNSKKDNSNPNNSNTDNSSSADNSNPDNSNSD 272
Query: 715 FSTTSRNIGNTNAEDNSH 732
S T + + ++ DNS+
Sbjct: 273 NSNTDNSNSDNSSSDNSN 290
>SB_42097| Best HMM Match : DUF1605 (HMM E-Value=3e-15)
Length = 889
Score = 29.9 bits (64), Expect = 8.1
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 232 RIEKLPKSSASDMAKKHMKGGLDAKALAAIDSKGSRSTEEFKKK--TQSTAQVNDAAATS 289
R K+PKS ++ H+ K A + GS +++E KKK T+ + + S
Sbjct: 742 RARKIPKSGSTAEIHSHLAEFPLRKMAATRRTGGSSASDEDKKKKGTKVMRKNGRKKSLS 801
Query: 290 DR---NSSNLNKTPSRYDANVSSRI 311
DR +SS L TPS+ A S ++
Sbjct: 802 DRPITDSSYLIPTPSKPSARGSEQV 826
>SB_32293| Best HMM Match : BRCA2 (HMM E-Value=0)
Length = 1649
Score = 29.9 bits (64), Expect = 8.1
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 653 EQNSDKSLVEHANTSESSSPDSFYTPP--STNVSKTSDERTAASNAPLKSDDVKINQIKT 710
+ SD + +E + E P S N +KT+ R+ AP S V ++K+
Sbjct: 115 QNESDNTSLEVTSLPELEENSELSLMPFASENTTKTTSNRSEREPAPAVSPLVSSQEVKS 174
Query: 711 FSA-PFSTTSRNIGNTNAEDNSH 732
F A P ST N D H
Sbjct: 175 FHALPQSTPKITKINVKRRDKRH 197
>SB_21130| Best HMM Match : Smg4_UPF3 (HMM E-Value=1.5)
Length = 565
Score = 29.9 bits (64), Expect = 8.1
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 653 EQNSDKSLVEHANTSESSSPDSFYTPP--STNVSKTSDERTAASNAPLKSDDVKINQIKT 710
+ SD + +E + E P S N +KT+ R+ AP S V ++K+
Sbjct: 256 QNESDNTSLEVTSLPELEENSELSLMPFASENTTKTTSNRSEREPAPAVSPLVSSQEVKS 315
Query: 711 FSA-PFSTTSRNIGNTNAEDNSH 732
F A P ST N D H
Sbjct: 316 FHALPQSTPKITKINVKRRDKRH 338
>SB_5444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 29.9 bits (64), Expect = 8.1
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 658 KSLVEHANTSESSSPDSFYTPPSTNVSKTSDERTAASNAPLKSDDVKINQIKTFSAPF 715
K LVE S SS P ++ P S+ + E A+SN L K + +K F
Sbjct: 44 KRLVEKYGNSSSSMPPAYSNEPPPPYSEKATEPVASSNVLLYVKQEKTDLLKDLQTSF 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.312 0.128 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,667,650
Number of Sequences: 59808
Number of extensions: 940106
Number of successful extensions: 2276
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2205
Number of HSP's gapped (non-prelim): 94
length of query: 775
length of database: 16,821,457
effective HSP length: 88
effective length of query: 687
effective length of database: 11,558,353
effective search space: 7940588511
effective search space used: 7940588511
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
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