GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002607-TA|BGIBMGA002607-PA|undefined
         (775 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   1.1  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    27   1.9  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           27   2.5  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   5.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 27.9 bits (59), Expect = 1.1
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 257  ALAAIDSKGSRSTEEFKKKTQSTA-QVNDAAATSDRNSSNLNKTPSRYDANVSSRIGSET 315
            A AA  S G + TE     T  T+   + +++T+DRN    +++P   D + S+ +   T
Sbjct: 945  APAAASSAGVQPTEHSVNSTNVTSINSSSSSSTADRNGDTKSRSPVVADGHNSTNVIKST 1004


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 27.1 bits (57), Expect = 1.9
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 13/115 (11%)

Query: 341  MKVDKTV-KESADTARLH-KKFERKLSVLVSKVTPPNMNDAMQGNVAIAEHIKDASDYLS 398
            + V+K + +E     +LH K  E   +  +S  T  +  + ++  V I + I D S    
Sbjct: 1452 LTVEKELDREKKSLYKLHIKATEECTNANLSLDTTSHSGNLLKATVYIND-INDNSPVFE 1510

Query: 399  ESVTTPGEKTEAL---KIL----IDHMDRIGNGVLLC--HGNIRKTYTDGADKLR 444
              + T G  T +L    IL     D  D + NG++    HG +RKT  +G D LR
Sbjct: 1511 SKIFTGGISTSSLFGATILQLQATDEDDGL-NGLVRYYRHGEVRKTLAEGLDDLR 1564


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 26.6 bits (56), Expect = 2.5
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 649 LHKREQNSDKSLVEHANTSESSSPDSFYTPPS 680
           LH+ +Q+S  S    +++  SSS  SF +P S
Sbjct: 103 LHQHQQSSSSSSSSSSSSMSSSSSSSFSSPDS 134


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 5.7
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 668 ESSSPDSFYTPPSTNVSKTSDERTAASNAPLKS 700
           +++SP +  TPPST+ ++T+      +   L+S
Sbjct: 558 KATSPPAVATPPSTSRARTATRTATTTTRALRS 590


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.312    0.128    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,508
Number of Sequences: 2123
Number of extensions: 28110
Number of successful extensions: 170
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 167
Number of HSP's gapped (non-prelim): 5
length of query: 775
length of database: 516,269
effective HSP length: 69
effective length of query: 706
effective length of database: 369,782
effective search space: 261066092
effective search space used: 261066092
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 52 (25.0 bits)