GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002606-TA|BGIBMGA002606-PA|undefined
         (491 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020645-1|AAH20645.1|  416|Homo sapiens Unknown (protein for IM...    31   7.0  

>BC020645-1|AAH20645.1|  416|Homo sapiens Unknown (protein for
           IMAGE:4659829) protein.
          Length = 416

 Score = 31.5 bits (68), Expect = 7.0
 Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 14/143 (9%)

Query: 351 SKQNEQLYKKEKAQRT-LGTAAAELKSAPGFTSTTPDVATTPIFVGALHKSADAATPKAL 409
           +K+   L +K K++ T L     EL+S P  T  T D+      + AL +  DA  P+  
Sbjct: 8   AKKQMMLIQKAKSRCTELEKEIGELRSKP-VTEGTGDI------IKALTERLDALLPEKA 60

Query: 410 HKDMQDKALQ---VLLKM-MKDNPSKELAKRNNYAMNYAVGANELETASNLVPFLPVKDI 465
             + Q  +L+   + +K  ++D+ +K          ++     E+E   N    + V+  
Sbjct: 61  ETEQQCLSLKKENIKMKQEVEDSVTKMGDAHKELEQSHINYVKEIENLKN--ELMAVRSK 118

Query: 466 ADEEKANLTKDVENLTPSELKIA 488
             E+KANL K +E    ++L+++
Sbjct: 119 YSEDKANLQKQLEEAMNTQLELS 141


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.131    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,556,520
Number of Sequences: 224733
Number of extensions: 2160816
Number of successful extensions: 4528
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4528
Number of HSP's gapped (non-prelim): 1
length of query: 491
length of database: 73,234,838
effective HSP length: 93
effective length of query: 398
effective length of database: 52,334,669
effective search space: 20829198262
effective search space used: 20829198262
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 67 (31.1 bits)