GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002606-TA|BGIBMGA002606-PA|undefined
         (491 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033125-5|CAA21828.1|  959|Drosophila melanogaster EG:EG0007.12...    33   1.2  
AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB ...    33   1.2  
AY094705-1|AAM11058.1|  923|Drosophila melanogaster GH11566p pro...    31   4.8  
AL009196-3|CAA15711.1|  923|Drosophila melanogaster EG:25E8.1 pr...    31   4.8  
AE014298-378|AAF45769.1|  923|Drosophila melanogaster CG2918-PA ...    31   4.8  
U88868-1|AAC24943.1|  619|Drosophila melanogaster elongation fac...    30   6.3  
BT024413-1|ABC86475.1|  107|Drosophila melanogaster IP03587p pro...    30   6.3  
AY070979-1|AAL48601.1|  619|Drosophila melanogaster RE07731p pro...    30   6.3  
AE014134-2205|AAF53194.1|  619|Drosophila melanogaster CG6382-PA...    30   6.3  

>AL033125-5|CAA21828.1|  959|Drosophila melanogaster EG:EG0007.12
           protein.
          Length = 959

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 400 SADAATPKALHKDMQDKALQVLLKMMKDNPSKELAKRNNYAMNYAVGA 447
           +ADAA   A      D +   +  M+KD+PS EL++ N   + Y   A
Sbjct: 135 TADAAKGSAAEAAAGDTSFSQVFAMLKDSPSAELSRPNRRVLQYGATA 182


>AE014298-603|AAF45924.1| 1911|Drosophila melanogaster CG4857-PB
           protein.
          Length = 1911

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 400 SADAATPKALHKDMQDKALQVLLKMMKDNPSKELAKRNNYAMNYAVGA 447
           +ADAA   A      D +   +  M+KD+PS EL++ N   + Y   A
Sbjct: 135 TADAAKGSAAEAAAGDTSFSQVFAMLKDSPSAELSRPNRRVLQYGATA 182


>AY094705-1|AAM11058.1|  923|Drosophila melanogaster GH11566p
           protein.
          Length = 923

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 112 ERISKPPKRSIIYLWREYAHTLPPETISRLRTMLDADEPF 151
           E++++  K S ++L R + H   PE I  L+ M+D  E F
Sbjct: 734 EKLAQLKKLSNVFLARHWEHEERPEAIKALKGMIDGAEKF 773


>AL009196-3|CAA15711.1|  923|Drosophila melanogaster EG:25E8.1
           protein.
          Length = 923

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 112 ERISKPPKRSIIYLWREYAHTLPPETISRLRTMLDADEPF 151
           E++++  K S ++L R + H   PE I  L+ M+D  E F
Sbjct: 734 EKLAQLKKLSNVFLARHWEHEERPEAIKALKGMIDGAEKF 773


>AE014298-378|AAF45769.1|  923|Drosophila melanogaster CG2918-PA
           protein.
          Length = 923

 Score = 30.7 bits (66), Expect = 4.8
 Identities = 14/40 (35%), Positives = 23/40 (57%)

Query: 112 ERISKPPKRSIIYLWREYAHTLPPETISRLRTMLDADEPF 151
           E++++  K S ++L R + H   PE I  L+ M+D  E F
Sbjct: 734 EKLAQLKKLSNVFLARHWEHEERPEAIKALKGMIDGAEKF 773


>U88868-1|AAC24943.1|  619|Drosophila melanogaster elongation factor
           1 alpha-likefactor protein.
          Length = 619

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 19/47 (40%), Positives = 25/47 (53%)

Query: 360 KEKAQRTLGTAAAELKSAPGFTSTTPDVATTPIFVGALHKSADAATP 406
           +E A   +  AAAE  + PG  S +   ATTP  VG+   +A AA P
Sbjct: 37  EEAAAVVVAAAAAEETADPGPASGSATPATTPDSVGSGGSTAGAAPP 83


>BT024413-1|ABC86475.1|  107|Drosophila melanogaster IP03587p
           protein.
          Length = 107

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 2/86 (2%)

Query: 107 LTDRLERIS--KPPKRSIIYLWREYAHTLPPETISRLRTMLDADEPFKPDQAYEYFVNMK 164
           L D+L   S  K  K  I +L    A +   +  S LR      +P  P++  +Y V+MK
Sbjct: 5   LVDKLNYYSTRKSFKYGIPFLIMMVAGSFGLQQFSNLRYQYAKKQPVTPEEMKKYGVSMK 64

Query: 165 KTKKKAATSRVNQIKKDVLELCGDKR 190
             K     S  +++K   +E   +KR
Sbjct: 65  NRKDVTLESEYDKVKSVDIENWENKR 90


>AY070979-1|AAL48601.1|  619|Drosophila melanogaster RE07731p
           protein.
          Length = 619

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 19/47 (40%), Positives = 25/47 (53%)

Query: 360 KEKAQRTLGTAAAELKSAPGFTSTTPDVATTPIFVGALHKSADAATP 406
           +E A   +  AAAE  + PG  S +   ATTP  VG+   +A AA P
Sbjct: 37  EEAAAVVVAAAAAEETADPGPASGSATPATTPDSVGSGGSTAGAAPP 83


>AE014134-2205|AAF53194.1|  619|Drosophila melanogaster CG6382-PA
           protein.
          Length = 619

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 19/47 (40%), Positives = 25/47 (53%)

Query: 360 KEKAQRTLGTAAAELKSAPGFTSTTPDVATTPIFVGALHKSADAATP 406
           +E A   +  AAAE  + PG  S +   ATTP  VG+   +A AA P
Sbjct: 37  EEAAAVVVAAAAAEETADPGPASGSATPATTPDSVGSGGSTAGAAPP 83


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.131    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,758,939
Number of Sequences: 52641
Number of extensions: 753714
Number of successful extensions: 2542
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2531
Number of HSP's gapped (non-prelim): 12
length of query: 491
length of database: 24,830,863
effective HSP length: 88
effective length of query: 403
effective length of database: 20,198,455
effective search space: 8139977365
effective search space used: 8139977365
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)