GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002605-TA|BGIBMGA002605-PA|IPR006616|Protein of unknown
function DM9
         (338 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   5.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   7.3  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    22   7.3  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/28 (28%), Positives = 16/28 (57%)

Query: 305 DIEPNIDDDRNSNNYDEENDEGHYYSED 332
           D   +++   N N+ + ++DEGH +  D
Sbjct: 96  DQNESLEASVNENSKNGDDDEGHEWQAD 123


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 6/13 (46%), Positives = 10/13 (76%)

Query: 66  QYAHTPNIISNSE 78
           +Y HTPN++ + E
Sbjct: 308 RYGHTPNVVLDEE 320


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/38 (28%), Positives = 14/38 (36%)

Query: 203 TYKLTNVEILCGYDCVWTPSWADNIPVGAVEAGYSEVD 240
           T  L  +  LC     +TP+W    P G        VD
Sbjct: 7   TVLLITIVGLCAAQLNFTPNWGKRAPEGESNRCKESVD 44


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.137    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,388
Number of Sequences: 317
Number of extensions: 4605
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 3
length of query: 338
length of database: 114,650
effective HSP length: 57
effective length of query: 281
effective length of database: 96,581
effective search space: 27139261
effective search space used: 27139261
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)