GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002605-TA|BGIBMGA002605-PA|IPR006616|Protein of unknown
function DM9
         (338 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032526-1|AAH32526.1|  712|Homo sapiens mitogen-activated prote...    31   4.4  
AY437560-1|AAR06179.1|  712|Homo sapiens TAK1-binding protein 3 ...    31   4.4  
AY371491-1|AAQ88279.1|  712|Homo sapiens TAK1 binding protein 3 ...    31   4.4  
AY331592-1|AAQ92939.1|  684|Homo sapiens NFkB activating protein...    31   4.4  
AY331591-1|AAQ92938.1|  712|Homo sapiens NFkB activating protein...    31   4.4  

>BC032526-1|AAH32526.1|  712|Homo sapiens mitogen-activated protein
           kinase kinase kinase 7 interacting protein 3 protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 261 QPSHKVCYIPYKNE---EKAFKYYEILIEPNQYPGFA 294
           Q SH V Y+PY      + + K  EI +EP+Q PG A
Sbjct: 343 QGSHSVAYLPYTASSLSKGSMKKIEITVEPSQRPGTA 379


>AY437560-1|AAR06179.1|  712|Homo sapiens TAK1-binding protein 3
           protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 261 QPSHKVCYIPYKNE---EKAFKYYEILIEPNQYPGFA 294
           Q SH V Y+PY      + + K  EI +EP+Q PG A
Sbjct: 343 QGSHSVAYLPYTASSLSKGSMKKIEITVEPSQRPGTA 379


>AY371491-1|AAQ88279.1|  712|Homo sapiens TAK1 binding protein 3
           protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 261 QPSHKVCYIPYKNE---EKAFKYYEILIEPNQYPGFA 294
           Q SH V Y+PY      + + K  EI +EP+Q PG A
Sbjct: 343 QGSHSVAYLPYTASSLSKGSMKKIEITVEPSQRPGTA 379


>AY331592-1|AAQ92939.1|  684|Homo sapiens NFkB activating protein 1
           isoform B protein.
          Length = 684

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 261 QPSHKVCYIPYKNE---EKAFKYYEILIEPNQYPGFA 294
           Q SH V Y+PY      + + K  EI +EP+Q PG A
Sbjct: 343 QGSHSVAYLPYTASSLSKGSMKKIEITVEPSQRPGTA 379


>AY331591-1|AAQ92938.1|  712|Homo sapiens NFkB activating protein 1
           isoform A protein.
          Length = 712

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 261 QPSHKVCYIPYKNE---EKAFKYYEILIEPNQYPGFA 294
           Q SH V Y+PY      + + K  EI +EP+Q PG A
Sbjct: 343 QGSHSVAYLPYTASSLSKGSMKKIEITVEPSQRPGTA 379


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.137    0.434 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,081,832
Number of Sequences: 224733
Number of extensions: 2817298
Number of successful extensions: 5871
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5866
Number of HSP's gapped (non-prelim): 5
length of query: 338
length of database: 73,234,838
effective HSP length: 90
effective length of query: 248
effective length of database: 53,008,868
effective search space: 13146199264
effective search space used: 13146199264
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)