Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002605-TA|BGIBMGA002605-PA|IPR006616|Protein of unknown
function DM9
(338 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Hypothetical ... 33 0.38
AL034488-13|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 31 1.5
Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical pr... 30 2.0
U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protei... 29 3.6
U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protei... 29 3.6
AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E prot... 29 3.6
AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E prot... 29 3.6
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z75547-11|CAA99906.2| 187|Caenorhabditis elegans Hypothetical p... 29 6.2
AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical ... 29 6.2
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 29 6.2
Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical pr... 28 8.2
AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagella... 28 8.2
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Hypothetical
protein Y67D8C.5 protein.
Length = 4177
Score = 32.7 bits (71), Expect = 0.38
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 284 LIEPNQYPGF-AYDSLIPSIKIDIEPNIDD-DRNSNNYDEENDEGHYYSEDDED 335
L P+ PG D ++ ++ D+E + +D D + N ++ E D+ EDDED
Sbjct: 2435 LAAPDAPPGINLVDEIMQQVQRDVEDDEEDEDGDQNEHEAEEDDHDREDEDDED 2488
>AL034488-13|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 305 DIEPNIDDDRNSNNYDEENDEGHYYSEDDED 335
D + + DDD + DEE DE +EDDE+
Sbjct: 52 DNDDDEDDDEEEEDEDEEEDEAEDEAEDDEE 82
>Z75711-1|CAB00032.1| 196|Caenorhabditis elegans Hypothetical
protein K02B12.2 protein.
Length = 196
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 257 PGKVQPSHKVC-YIPYKNEEKAFKYYEILIEPNQYPGFAYDSLIPSIKIDIEPNIDDDRN 315
P K + S +V I K E+K + L+E + A +SL+ + +P +D+
Sbjct: 94 PAKKRKSEEVKPKIEAKIEKKVAREETKLMESSDKIDKAIESLVAETENQYDP-LDNVEM 152
Query: 316 SNNYDEENDEGHYYSEDDED 335
+ DEE+D G ED+ED
Sbjct: 153 DSWDDEEDDSGEDQPEDEED 172
>U97194-4|AAP13781.1| 521|Caenorhabditis elegans Cyclin e protein
1, isoform b protein.
Length = 521
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 305 DIEPNIDDDRNSNNYDEENDEGHY---YSEDDEDY 336
DIE I+DD + D ND+ Y SED++DY
Sbjct: 156 DIEEEIEDDFDDEEEDVVNDKEEYEEIESEDEDDY 190
>U97194-3|AAK68235.1| 524|Caenorhabditis elegans Cyclin e protein
1, isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 305 DIEPNIDDDRNSNNYDEENDEGHY---YSEDDEDY 336
DIE I+DD + D ND+ Y SED++DY
Sbjct: 159 DIEEEIEDDFDDEEEDVVNDKEEYEEIESEDEDDY 193
>AF520616-1|AAM78547.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 305 DIEPNIDDDRNSNNYDEENDEGHY---YSEDDEDY 336
DIE I+DD + D ND+ Y SED++DY
Sbjct: 159 DIEEEIEDDFDDEEEDVVNDKEEYEEIESEDEDDY 193
>AF058331-1|AAC63505.1| 524|Caenorhabditis elegans cyclin E
protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 305 DIEPNIDDDRNSNNYDEENDEGHY---YSEDDEDY 336
DIE I+DD + D ND+ Y SED++DY
Sbjct: 159 DIEEEIEDDFDDEEEDVVNDKEEYEEIESEDEDDY 193
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 300 PSIKIDIEPNIDDDRNSNNYDEENDEGHYYSEDDED 335
P + D + DDD + ++ D+E D+G+ +DD D
Sbjct: 254 PDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGD 289
>Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 29.1 bits (62), Expect = 4.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 300 PSIKIDIEPNIDDDRNSNNYDEENDEGHYYSEDDED 335
P + D + DDD + ++ D+E D+G+ +DD D
Sbjct: 254 PDLDDDDDDEDDDDDDGDDDDDEKDDGNDAEKDDGD 289
>Z75547-11|CAA99906.2| 187|Caenorhabditis elegans Hypothetical
protein R11D1.9 protein.
Length = 187
Score = 28.7 bits (61), Expect = 6.2
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 128 WRFELPPPEIKRPLKTVEGGKLQWIKYEDSMPKNAVCGGHEHE 170
W+ LP E R L TVE + W E MP V EHE
Sbjct: 35 WKHALP--EKSRSLATVEEAPIDWSYVERLMPIEVVPNVPEHE 75
>AF067216-8|AAN84852.1| 954|Caenorhabditis elegans Hypothetical
protein C35E7.5b protein.
Length = 954
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/41 (26%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 296 DSLIPSIK-IDIEPNIDDDRNSNNYDEENDEGHYYSEDDED 335
+SL+ ++ +++ ++ + +S+ DE+ DE Y ED+E+
Sbjct: 855 ESLVEKVETLEVTKKVEVEDDSDCLDEDEDEEEYEDEDEEE 895
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/41 (26%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 296 DSLIPSIK-IDIEPNIDDDRNSNNYDEENDEGHYYSEDDED 335
+SL+ ++ +++ ++ + +S+ DE+ DE Y ED+E+
Sbjct: 855 ESLVEKVETLEVTKKVEVEDDSDCLDEDEDEEEYEDEDEEE 895
>Z79600-5|CAB01878.2| 412|Caenorhabditis elegans Hypothetical
protein F59C6.7 protein.
Length = 412
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 292 GFAYDSLIPSIKIDIEPNIDDDRNSNNYDEENDEGHYYSEDDEDYN 337
GF + +IP + D + +D+ ++ D+ +E + +DD+D N
Sbjct: 154 GFQWQKMIPPKEEDEDTAVDEQDEDDDNDDIVEEPMNFLDDDDDDN 199
>AF520567-1|AAM75345.1| 412|Caenorhabditis elegans intraflagellar
transport proteinCHE-13 protein.
Length = 412
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 292 GFAYDSLIPSIKIDIEPNIDDDRNSNNYDEENDEGHYYSEDDEDYN 337
GF + +IP + D + +D+ ++ D+ +E + +DD+D N
Sbjct: 154 GFQWQKMIPPKEEDEDTAVDEQDEDDDNDDIVEEPMNFLDDDDDDN 199
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.137 0.434
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,053,608
Number of Sequences: 27539
Number of extensions: 480559
Number of successful extensions: 1504
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1456
Number of HSP's gapped (non-prelim): 58
length of query: 338
length of database: 12,573,161
effective HSP length: 82
effective length of query: 256
effective length of database: 10,314,963
effective search space: 2640630528
effective search space used: 2640630528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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