GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002603-TA|BGIBMGA002603-PA|undefined
         (81 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    66   3e-14
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    66   3e-14
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    21   1.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   2.2  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    19   5.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    19   5.1  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    19   5.1  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    19   5.1  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    19   5.1  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    19   5.1  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 66.5 bits (155), Expect = 3e-14
 Identities = 32/42 (76%), Positives = 35/42 (83%), Gaps = 3/42 (7%)

Query: 2   VCKARPKWQFLPQAPGYVPVYIRSGDTPLEEINPDLAEAFNA 43
           V KAR   QFLP  PGYVPVYIR GDTPLE+INPDLAEAF++
Sbjct: 387 VSKAR---QFLPALPGYVPVYIRPGDTPLEDINPDLAEAFSS 425


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 66.5 bits (155), Expect = 3e-14
 Identities = 32/42 (76%), Positives = 35/42 (83%), Gaps = 3/42 (7%)

Query: 2   VCKARPKWQFLPQAPGYVPVYIRSGDTPLEEINPDLAEAFNA 43
           V KAR   QFLP  PGYVPVYIR GDTPLE+INPDLAEAF++
Sbjct: 212 VSKAR---QFLPALPGYVPVYIRPGDTPLEDINPDLAEAFSS 250


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase
          like protein E3 protein.
          Length = 138

 Score = 21.4 bits (43), Expect = 1.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)

Query: 57 APEIPEHYSSKLN 69
          APE+PEH+   L+
Sbjct: 18 APELPEHWEGVLD 30


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 56  AAPEIPEHYSSKLNVPEN 73
           + PE PEHY ++  +  N
Sbjct: 102 STPESPEHYYNQKTLQAN 119


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
          protein.
          Length = 377

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 9/29 (31%), Positives = 13/29 (44%)

Query: 31 EEINPDLAEAFNALPAGRSAGKDVEAAPE 59
          E+INPDL    N    G     +++   E
Sbjct: 45 EDINPDLCTHINYAFVGLDKDCNIQVLDE 73


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
          transcription factor Labialprotein.
          Length = 353

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 53 DVEAAPEIPEHYSS 66
          D+  A ++P HYS+
Sbjct: 28 DIPNAQQMPPHYSN 41


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
          transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 44 LPAGRSAGKDVEAAPEIPEHYSSKLNVPE 72
          +P  R+ G      P   +HY + + VP+
Sbjct: 10 MPDMRNGGVVSAEHPHQHQHYGAAVQVPQ 38


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
          protein.
          Length = 210

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 53 DVEAAPEIPEHYSS 66
          D+  A ++P HYS+
Sbjct: 28 DIPNAQQMPPHYSN 41


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
          protein.
          Length = 253

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 6/14 (42%), Positives = 10/14 (71%)

Query: 53 DVEAAPEIPEHYSS 66
          D+  A ++P HYS+
Sbjct: 28 DIPNAQQMPPHYSN 41


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
          protein.
          Length = 325

 Score = 19.4 bits (38), Expect = 5.1
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 44 LPAGRSAGKDVEAAPEIPEHYSSKLNVPE 72
          +P  R+ G      P   +HY + + VP+
Sbjct: 10 MPDMRNGGVVSAEHPHQHQHYGAAVQVPQ 38


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.133    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,489
Number of Sequences: 317
Number of extensions: 771
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of query: 81
length of database: 114,650
effective HSP length: 46
effective length of query: 35
effective length of database: 100,068
effective search space:  3502380
effective search space used:  3502380
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.1 bits)
S2: 36 (18.6 bits)