Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002603-TA|BGIBMGA002603-PA|undefined
(81 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 27 2.1
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 27 2.1
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 27 2.1
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 27 2.1
Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical pr... 26 2.7
Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical pr... 26 2.7
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 26 3.6
Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical pr... 25 4.8
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr... 25 4.8
Z50044-4|CAA90356.1| 164|Caenorhabditis elegans Hypothetical pr... 25 6.3
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 26.6 bits (56), Expect = 2.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 25 SGDTPLEEINPDLAEAFNALPAGRSAGKDVEAAPEIP 61
S L E+N + A + PA RS+ D+ A+ E+P
Sbjct: 367 SSSISLSEVNSSTSIASESSPAKRSSNFDLTASNELP 403
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 26.6 bits (56), Expect = 2.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 25 SGDTPLEEINPDLAEAFNALPAGRSAGKDVEAAPEIP 61
S L E+N + A + PA RS+ D+ A+ E+P
Sbjct: 381 SSSISLSEVNSSTSIASESSPAKRSSNFDLTASNELP 417
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 27 DTPLEEINPDLAEAFNALPAGRSAGKDVEAAPEIP 61
D P +++ AE FN + A K + PEIP
Sbjct: 550 DIPTSKVSTISAEQFNEMRGNEDAKKTSDEPPEIP 584
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 26.6 bits (56), Expect = 2.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 27 DTPLEEINPDLAEAFNALPAGRSAGKDVEAAPEIP 61
D P +++ AE FN + A K + PEIP
Sbjct: 747 DIPTSKVSTISAEQFNEMRGNEDAKKTSDEPPEIP 781
>Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical
protein F59A2.1b protein.
Length = 884
Score = 26.2 bits (55), Expect = 2.7
Identities = 10/37 (27%), Positives = 23/37 (62%)
Query: 37 LAEAFNALPAGRSAGKDVEAAPEIPEHYSSKLNVPEN 73
+AEA ++ AG++ K+++ A E+ + ++ +P N
Sbjct: 409 VAEAKSSSNAGKTIDKEIKPAAEVKKEVKQEVVIPSN 445
>Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical
protein F59A2.1a protein.
Length = 860
Score = 26.2 bits (55), Expect = 2.7
Identities = 10/37 (27%), Positives = 23/37 (62%)
Query: 37 LAEAFNALPAGRSAGKDVEAAPEIPEHYSSKLNVPEN 73
+AEA ++ AG++ K+++ A E+ + ++ +P N
Sbjct: 385 VAEAKSSSNAGKTIDKEIKPAAEVKKEVKQEVVIPSN 421
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 25.8 bits (54), Expect = 3.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 29 PLEEINPDLAEAFNALPAGRSAGKDVEAAPEIPEHYSSKLNV 70
PLE+ + A P+ R A + PE + Y+S+ NV
Sbjct: 1118 PLEQGQSSVDSQSTAEPSPRKASQQAYICPECKKTYASRKNV 1159
>Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical
protein C04F12.1 protein.
Length = 944
Score = 25.4 bits (53), Expect = 4.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 46 AGRSAGKDVEAAPEIPEHYSSKLNVPENP 74
A + KD ++AP +P S+++V NP
Sbjct: 22 ASQQVAKDEQSAPVVPTPELSRVSVSSNP 50
>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical
protein B0024.8 protein.
Length = 1185
Score = 25.4 bits (53), Expect = 4.8
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 36 DLAEAFNALPAGRSAGKDVEAAPEIPEHYSSKLNVPENPEIGDS 79
DLAEA +LP+ V A P +S P+ P I S
Sbjct: 516 DLAEAEMSLPSNADLSWIVSNAASNPNSSTSSWEAPKRPPISPS 559
>Z50044-4|CAA90356.1| 164|Caenorhabditis elegans Hypothetical
protein F22B5.4 protein.
Length = 164
Score = 25.0 bits (52), Expect = 6.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 16 PGYVPVYIRSGDTPLEEINPDLAEAFNALP 45
P +V V I+ GDTP + + L A+ P
Sbjct: 52 PRFVKVAIQKGDTPYQFLVRRLGHAYEVYP 81
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.312 0.133 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,352,009
Number of Sequences: 27539
Number of extensions: 89958
Number of successful extensions: 153
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140
Number of HSP's gapped (non-prelim): 13
length of query: 81
length of database: 12,573,161
effective HSP length: 61
effective length of query: 20
effective length of database: 10,893,282
effective search space: 217865640
effective search space used: 217865640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 51 (24.6 bits)
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