GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002602-TA|BGIBMGA002602-PA|undefined
         (192 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   2.8  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   4.9  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
          growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 45 RDSRTHVTDRARQFPILVLL 64
          RD+  H+T+  R+FP L +L
Sbjct: 78 RDNYRHITELKRRFPGLRVL 97


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory
          receptor candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)

Query: 76 PSAKSLKGHLEPIYVQVTE 94
          PSA S+  + +PIY +++E
Sbjct: 42 PSALSIIYYRQPIYAKISE 60


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.134    0.382 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,295
Number of Sequences: 317
Number of extensions: 472
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 192
length of database: 114,650
effective HSP length: 53
effective length of query: 139
effective length of database: 97,849
effective search space: 13601011
effective search space used: 13601011
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 41 (20.6 bits)