GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002601-TA|BGIBMGA002601-PA|undefined
         (105 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p pro...    27   3.5  
AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p pro...    27   3.5  
AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB...    27   3.5  
AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA...    27   3.5  

>BT021383-1|AAX33531.1| 1117|Drosophila melanogaster LD37257p
           protein.
          Length = 1117

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 21  QELYKVSGADLIDLLRGFPTEQEAL--ELERIKGDKIQAPDGIYFQPEDE 68
           +EL+    + +ID +   P ++++L  E ERI  D + A D +  Q EDE
Sbjct: 749 KELFDELNSTMIDKINSVPPDEDSLKKERERIVAD-LAALDKLMAQKEDE 797


>AY061106-1|AAL28654.1| 1177|Drosophila melanogaster LD09503p
           protein.
          Length = 1177

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 21  QELYKVSGADLIDLLRGFPTEQEAL--ELERIKGDKIQAPDGIYFQPEDE 68
           +EL+    + +ID +   P ++++L  E ERI  D + A D +  Q EDE
Sbjct: 809 KELFDELNSTMIDKINSVPPDEDSLKKERERIVAD-LAALDKLMAQKEDE 857


>AE014296-2728|AAF49469.2| 1117|Drosophila melanogaster CG4877-PB,
           isoform B protein.
          Length = 1117

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 21  QELYKVSGADLIDLLRGFPTEQEAL--ELERIKGDKIQAPDGIYFQPEDE 68
           +EL+    + +ID +   P ++++L  E ERI  D + A D +  Q EDE
Sbjct: 749 KELFDELNSTMIDKINSVPPDEDSLKKERERIVAD-LAALDKLMAQKEDE 797


>AE014296-2727|AAF49470.3| 1117|Drosophila melanogaster CG4877-PA,
           isoform A protein.
          Length = 1117

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)

Query: 21  QELYKVSGADLIDLLRGFPTEQEAL--ELERIKGDKIQAPDGIYFQPEDE 68
           +EL+    + +ID +   P ++++L  E ERI  D + A D +  Q EDE
Sbjct: 749 KELFDELNSTMIDKINSVPPDEDSLKKERERIVAD-LAALDKLMAQKEDE 797


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.137    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,575,524
Number of Sequences: 52641
Number of extensions: 170760
Number of successful extensions: 342
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 342
Number of HSP's gapped (non-prelim): 4
length of query: 105
length of database: 24,830,863
effective HSP length: 74
effective length of query: 31
effective length of database: 20,935,429
effective search space: 648998299
effective search space used: 648998299
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)