Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002601-TA|BGIBMGA002601-PA|undefined
(105 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying defe... 27 2.6
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe... 27 2.6
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe... 27 2.6
AL032624-3|CAL36506.1| 232|Caenorhabditis elegans Hypothetical ... 26 4.5
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein. 26 4.5
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 26 6.0
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 26 6.0
AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical ... 26 6.0
AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein. 26 6.0
Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein. 25 7.9
Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical p... 25 7.9
AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical ... 25 7.9
>U23448-3|AAO26017.1| 612|Caenorhabditis elegans Egg laying
defective protein 27,isoform c protein.
Length = 612
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 14 NYNDAKDQELYKVS----GADLIDLLRGFPTEQEALELERIKGDKIQAPDGIYFQPEDEA 69
+Y+D D+E K++ D + +L GF E+ E++ I+ +G+ P
Sbjct: 98 SYDDDDDEEEGKMTIDEGDDDPMPVLNGFKKEESVEEIKLELNGTIKKENGVETDPTTPT 157
Query: 70 LSLESEKK 77
S+E+E +
Sbjct: 158 CSMEAENE 165
>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying
defective protein 27,isoform b protein.
Length = 1124
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 14 NYNDAKDQELYKVS----GADLIDLLRGFPTEQEALELERIKGDKIQAPDGIYFQPEDEA 69
+Y+D D+E K++ D + +L GF E+ E++ I+ +G+ P
Sbjct: 610 SYDDDDDEEEGKMTIDEGDDDPMPVLNGFKKEESVEEIKLELNGTIKKENGVETDPTTPT 669
Query: 70 LSLESEKK 77
S+E+E +
Sbjct: 670 CSMEAENE 677
>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying
defective protein 27,isoform a protein.
Length = 1129
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 14 NYNDAKDQELYKVS----GADLIDLLRGFPTEQEALELERIKGDKIQAPDGIYFQPEDEA 69
+Y+D D+E K++ D + +L GF E+ E++ I+ +G+ P
Sbjct: 613 SYDDDDDEEEGKMTIDEGDDDPMPVLNGFKKEESVEEIKLELNGTIKKENGVETDPTTPT 672
Query: 70 LSLESEKK 77
S+E+E +
Sbjct: 673 CSMEAENE 680
>AL032624-3|CAL36506.1| 232|Caenorhabditis elegans Hypothetical
protein Y49A10A.2 protein.
Length = 232
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 36 RGFPTEQ----EALELERIKGDKIQAPDGIYFQPEDEALSLESEKKY 78
RG P E+ E + ER+K D+ + DG Y ED+ ++ E + Y
Sbjct: 137 RGEPKEELEKEEQEKEERMKEDEEKNGDGEYEDDEDQKMADEKNRNY 183
>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
Length = 1129
Score = 26.2 bits (55), Expect = 4.5
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 14 NYNDAKDQELYKVS----GADLIDLLRGFPTEQEALELERIKGDKIQAPDGIYFQPEDEA 69
+Y+D D+E K++ D + +L GF E+ E++ I+ +G+ P
Sbjct: 613 SYDDDDDEEEGKMTIDEGDDDPMPVLNGFKKEESVEEIKLELNGTIKKENGVETDPTTLT 672
Query: 70 LSLESEKK 77
S+E+E +
Sbjct: 673 CSMEAENE 680
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 21 QELYKVSGADLIDLLRGFPTEQEALELERIKGDKIQAPDGIYFQPEDEAL 70
QELY ++ D +E LE RIK ++++ + + Q D+ L
Sbjct: 720 QELYAAKAREIEDFKFKRQRAEEELETLRIKYERVKRNESVPAQSGDQVL 769
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 21 QELYKVSGADLIDLLRGFPTEQEALELERIKGDKIQAPDGIYFQPEDEAL 70
QELY ++ D +E LE RIK ++++ + + Q D+ L
Sbjct: 723 QELYAAKAREIEDFKFKRQRAEEELETLRIKYERVKRNESVPAQSGDQVL 772
>AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical
protein Y54G9A.7 protein.
Length = 244
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 21 QELYKVSGADLIDLLRGFPTEQEALELERIK 51
++LY + ++ ID G PT +EA +++ +K
Sbjct: 204 EQLYGLPKSEYIDKRAGLPTPEEAEQIKALK 234
>AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein.
Length = 244
Score = 25.8 bits (54), Expect = 6.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 21 QELYKVSGADLIDLLRGFPTEQEALELERIK 51
++LY + ++ ID G PT +EA +++ +K
Sbjct: 204 EQLYGLPKSEYIDKRAGLPTPEEAEQIKALK 234
>Z99267-1|CAB16465.1| 732|Caenorhabditis elegans C33A12.12 protein.
Length = 732
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 2 QWCVLFVLLSLFNYNDAKDQELYKVSGADLIDLLRGFPTEQEALELERI 50
++C+ ++L N N+ ++++ D+ LL+ E L L +
Sbjct: 82 KYCLESLILGSSNLNEGPSNDIFQACVVDMASLLKNLLNEGSLLNLRHL 130
>Z68493-14|CAA92801.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 2 QWCVLFVLLSLFNYNDAKDQELYKVSGADLIDLLRGFPTEQEALELERI 50
++C+ ++L N N+ ++++ D+ LL+ E L L +
Sbjct: 82 KYCLESLILGSSNLNEGPSNDIFQACVVDMASLLKNLLNEGSLLNLRHL 130
>AL033537-1|CAA22147.1| 732|Caenorhabditis elegans Hypothetical
protein C33A12.12 protein.
Length = 732
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 2 QWCVLFVLLSLFNYNDAKDQELYKVSGADLIDLLRGFPTEQEALELERI 50
++C+ ++L N N+ ++++ D+ LL+ E L L +
Sbjct: 82 KYCLESLILGSSNLNEGPSNDIFQACVVDMASLLKNLLNEGSLLNLRHL 130
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.137 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,372,849
Number of Sequences: 27539
Number of extensions: 89407
Number of successful extensions: 174
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 166
Number of HSP's gapped (non-prelim): 12
length of query: 105
length of database: 12,573,161
effective HSP length: 71
effective length of query: 34
effective length of database: 10,617,892
effective search space: 361008328
effective search space used: 361008328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
- SilkBase 1999-2023 -