BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002599-TA|BGIBMGA002599-PA|undefined
(185 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6C1G3 Cluster: Similarities with DEHA0E11308g Debaryom... 35 1.0
UniRef50_Q5FP23 Cluster: Transcriptional regulator; n=1; Glucono... 33 3.1
UniRef50_UPI00006A1011 Cluster: FAT tumor suppressor homolog 3; ... 33 4.1
UniRef50_O83868 Cluster: ATP-dependent nuclease, subunit A, puta... 33 4.1
UniRef50_A3LXY9 Cluster: Predicted protein; n=1; Pichia stipitis... 33 4.1
UniRef50_Q9FCR4 Cluster: Flagellin; n=1; Pseudomonas citronellol... 33 5.4
UniRef50_Q22DV0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.4
UniRef50_A6NIM4 Cluster: Uncharacterized protein FAT3; n=43; Eut... 33 5.4
UniRef50_UPI0000F2CA38 Cluster: PREDICTED: hypothetical protein;... 32 7.1
UniRef50_Q4QHR0 Cluster: Putative uncharacterized protein; n=3; ... 32 7.1
UniRef50_Q0U531 Cluster: Putative uncharacterized protein; n=1; ... 32 7.1
UniRef50_Q0HVR5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
UniRef50_A3ZTU4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza s... 32 9.4
UniRef50_Q4Q8E0 Cluster: Putative uncharacterized protein; n=3; ... 32 9.4
>UniRef50_Q6C1G3 Cluster: Similarities with DEHA0E11308g
Debaryomyces hansenii IPF 12024.1; n=1; Yarrowia
lipolytica|Rep: Similarities with DEHA0E11308g
Debaryomyces hansenii IPF 12024.1 - Yarrowia lipolytica
(Candida lipolytica)
Length = 531
Score = 35.1 bits (77), Expect = 1.0
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 67 FGYHNPRILADKSK-SSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQHSSSVST 125
FGY + K + S QQ +A +T P+Q +H S + H H + +Q ++
Sbjct: 174 FGYLQMHFNSTKKRRKSNAKAQQQGLAHATSPTQHSHPTSPSHSPHSHMIHSQSVPHMAQ 233
Query: 126 HRRLRAVLATITQHSAQFRLTANFEQH 152
H +Q Q + N +QH
Sbjct: 234 HHMSLQQHVAHSQQQQQHQHHMNHQQH 260
>UniRef50_Q5FP23 Cluster: Transcriptional regulator; n=1;
Gluconobacter oxydans|Rep: Transcriptional regulator -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 303
Score = 33.5 bits (73), Expect = 3.1
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 31 ISPARWKIFPLSY--IPTTGDLRRNNRSLLIHHQRIKNFG--YHNPRILADKSKSSTVVP 86
IS ARW P +P +G + NN +L + G Y I++D+ KS +VP
Sbjct: 199 ISSARWSFGPNGERTVPVSGPMHANNGDIL-REAAVAGQGIIYQPTFIVSDELKSGRLVP 257
Query: 87 QQASIAASTGPSQPTHRASWPY 108
+ TGP A P+
Sbjct: 258 LPLDVPVMTGPELHAVYAPTPH 279
>UniRef50_UPI00006A1011 Cluster: FAT tumor suppressor homolog 3;
n=1; Xenopus tropicalis|Rep: FAT tumor suppressor
homolog 3 - Xenopus tropicalis
Length = 978
Score = 33.1 bits (72), Expect = 4.1
Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)
Query: 26 SVYRAISPARWKIFPLSYIPTTGDLRRNN-----RSLLIHHQRIKNFGYHNPRILADKS- 79
++Y+ + P + + P++Y P RNN L + HQ + F +PRIL +
Sbjct: 849 NIYQEVGPPQVPVRPMAYTPCFQSDSRNNLDKMVDGLGVEHQEMTTFHPESPRILTARRG 908
Query: 80 -KSSTVVPQQASIAASTGPSQPTHRASWPYG 109
+V P S++ + +W G
Sbjct: 909 VVVCSVAPNLPSVSPCRSDCDSIRKGAWDTG 939
>UniRef50_O83868 Cluster: ATP-dependent nuclease, subunit A, putative;
n=1; Treponema pallidum|Rep: ATP-dependent nuclease,
subunit A, putative - Treponema pallidum
Length = 1239
Score = 33.1 bits (72), Expect = 4.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 69 YHNPRILADKSKSSTVVPQQASIAASTGPSQPTHRASWPYGTHLHCLIAQ 118
++ PR++ + + P Q S +AS P P +GTH+H L+AQ
Sbjct: 1040 HYYPRLVQPVTSLVSPAPGQNSASASPSPLTPQSPRGVEFGTHVHELLAQ 1089
>UniRef50_A3LXY9 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 875
Score = 33.1 bits (72), Expect = 4.1
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 99 QPTHRASWPYGTHLHCLIAQHSSSVSTHRRLRAVLATITQHSAQFRLTANFEQHWRHARS 158
QP S+PY H H + Q H A L QH Q L Q ++A+
Sbjct: 68 QPQQSPSFPYNQHQHLQLQQQQQK-QYHYDFNAQLQH--QHDPQHELHQQQLQQQQYAQY 124
Query: 159 IQAQPRLTAGFEQHWPLQ 176
Q QP+ EQH Q
Sbjct: 125 YQQQPQNQQNQEQHTQAQ 142
>UniRef50_Q9FCR4 Cluster: Flagellin; n=1; Pseudomonas
citronellolis|Rep: Flagellin - Pseudomonas citronellolis
Length = 316
Score = 32.7 bits (71), Expect = 5.4
Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 4/80 (5%)
Query: 53 NNRSLLIHHQRIKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQP----THRASWPY 108
N++ +H R K + NP + S T P A A +T P +P R + PY
Sbjct: 17 NDKRRHLHRPRPKKARFRNPPTSCNACVSWTCSPPTAPTAKTTAPPEPGVRIADRRTDPY 76
Query: 109 GTHLHCLIAQHSSSVSTHRR 128
H H QH + +R
Sbjct: 77 LRHHHLRWRQHRGDPAQRQR 96
>UniRef50_Q22DV0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 710
Score = 32.7 bits (71), Expect = 5.4
Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 117 AQHSSSVSTHRRLRAVLATITQHSAQFRLTANFEQHWRHARSIQAQPRLTAGFEQHWPLQ 176
AQ S S H A A +S + L FE+ R +S+Q Q GF Q+ PLQ
Sbjct: 198 AQKQSGPSQHTSFSAN-AKDNDNSCKIALAEVFERIRREEKSLQQQQSKQQGFNQNLPLQ 256
Query: 177 AN 178
N
Sbjct: 257 QN 258
>UniRef50_A6NIM4 Cluster: Uncharacterized protein FAT3; n=43;
Euteleostomi|Rep: Uncharacterized protein FAT3 - Homo
sapiens (Human)
Length = 4558
Score = 32.7 bits (71), Expect = 5.4
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 24 GPSVYRAISPARWKIFPLSYIPTTGDLRRNNRSLLI-----HHQRIKNFGYHNPRILADK 78
G +VY+ + P + + P++Y P R+N ++ HQ + F +PRIL +
Sbjct: 4219 GRNVYQEVGPPQVPVRPMAYTPCFQSDSRSNLDKIVDGLGGEHQEMTTFHPESPRILTAR 4278
Query: 79 S--KSSTVVPQQASIAASTGPSQPTHRASWPYGT 110
+V P +++ + W GT
Sbjct: 4279 RGVVVCSVAPNLPAVSPCRSDCDSIRKNGWDAGT 4312
>UniRef50_UPI0000F2CA38 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 261
Score = 32.3 bits (70), Expect = 7.1
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 134 ATITQHSAQFRLTANFEQHWRHARSIQAQPRLTAGF-EQHWPLQAN 178
A ++ ++Q L+ QHW R QAQP LT F E W + N
Sbjct: 72 AQLSHLASQCGLSVRQTQHWFRRRRNQAQPNLTKKFCESRWTMWLN 117
>UniRef50_Q4QHR0 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 287
Score = 32.3 bits (70), Expect = 7.1
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 8 HFQDKAHIYKFRTTTFGP-SVYRAISPARWKIFPLSYIPTTGDLRRNNRSLLIHHQRI 64
H + + K R+ GP S++R I + SY+ R ++R LL+HHQRI
Sbjct: 5 HSRATRQLVKERSKIEGPRSLHRGIHYQENEAHASSYMQNAKKKRADHRDLLVHHQRI 62
>UniRef50_Q0U531 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 584
Score = 32.3 bits (70), Expect = 7.1
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 53 NNRSLLIHHQRIKNFGYHNPRILADKSKSSTVVPQQASIAASTGPSQPTH 102
N S HH R+ + R+L +S S TV PQ S+AA+ G + H
Sbjct: 260 NTNSSNSHHARLPDADMITSRLL-QRSASHTVPPQTTSVAATVGTATERH 308
>UniRef50_Q0HVR5 Cluster: Putative uncharacterized protein; n=1;
Shewanella sp. MR-7|Rep: Putative uncharacterized
protein - Shewanella sp. (strain MR-7)
Length = 292
Score = 31.9 bits (69), Expect = 9.4
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 102 HRASWPYGTHLHCLIAQHSSSVSTHRRLRAVLATITQHSAQFRLTANFEQHWRHARS 158
H G HLH IA + V T R+ A+ A + + + NF+ +WRH ++
Sbjct: 196 HSEKEDIGYHLHGFIAWNDEEVETVRK--ALKAAVGEWETNKQCQLNFKVNWRHIQT 250
>UniRef50_A3ZTU4 Cluster: Putative uncharacterized protein; n=1;
Blastopirellula marina DSM 3645|Rep: Putative
uncharacterized protein - Blastopirellula marina DSM
3645
Length = 1871
Score = 31.9 bits (69), Expect = 9.4
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 91 IAASTGPSQPTHRASWP-YGTHLHCLIA----QHSSSVSTHRRLRAVLATITQHSAQFRL 145
++A+ G S+ HRAS Y HL CL+ +H S+V+T+ R+R L T + L
Sbjct: 815 LSAAIGSSEQ-HRASRQLYARHLFCLMMLLTFEHDSAVTTNIRMRYKLPNFTPNHTGLAL 873
Query: 146 T 146
T
Sbjct: 874 T 874
>UniRef50_Q7XQJ7 Cluster: OSJNBa0017B10.11 protein; n=11; Oryza sativa
(japonica cultivar-group)|Rep: OSJNBa0017B10.11 protein -
Oryza sativa subsp. japonica (Rice)
Length = 1814
Score = 31.9 bits (69), Expect = 9.4
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 75 LADKSKSSTVVPQQASIA-ASTGPSQPTHRASW 106
LAD T P+ S+ AS+GPSQP H A W
Sbjct: 1269 LADFVAEWTPAPEPVSVPEASSGPSQPPHTAHW 1301
>UniRef50_Q4Q8E0 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1123
Score = 31.9 bits (69), Expect = 9.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 118 QHSSSVSTHRRLRAVLATITQHSAQFRLTANFEQHWRHARSIQAQ 162
QH S + RRLR +A + + A+ R+ A E RHAR +A+
Sbjct: 997 QHVSLFHSERRLRDRVALVEETDARVRIMAAAEASLRHARKREAR 1041
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.321 0.129 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,999,488
Number of Sequences: 1657284
Number of extensions: 8073589
Number of successful extensions: 18815
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 18811
Number of HSP's gapped (non-prelim): 15
length of query: 185
length of database: 575,637,011
effective HSP length: 96
effective length of query: 89
effective length of database: 416,537,747
effective search space: 37071859483
effective search space used: 37071859483
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 69 (31.9 bits)
- SilkBase 1999-2023 -