GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002599-TA|BGIBMGA002599-PA|undefined
         (185 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   1.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   5.5  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   9.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   9.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   9.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.6  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 86  PQQASIAASTGPSQPTHRASWPY 108
           PQ +  +AST P+  T  + +PY
Sbjct: 69  PQHSGSSASTSPAARTTSSMYPY 91


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 71  NPRILADKSKSSTVVPQQASIAASTGPSQ 99
           NPRI +  S S++  P     AA+  PS+
Sbjct: 514 NPRIASAPSSSTSSSPPAKGAAAAGQPSK 542


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query: 101 THRASWPYGTH 111
           T  +SWPY TH
Sbjct: 171 TDFSSWPYDTH 181


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 121 SSVSTHRRLRAVLATITQHSAQFRLTANFE 150
           S +  H   R ++    Q  A ++LT N E
Sbjct: 331 SDIPLHDATRDLVLMSEQFEADYKLTRNLE 360


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 37  KIFPLSYIPTTGDLRRNNRSLL 58
           KI P   +P  G+L  NN+  L
Sbjct: 863 KIVPEELVPLEGNLMINNKYAL 884


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query: 48  GDLRRNNRSLLIHHQRIKNFGYHNPRILADKSKSSTVVPQQASIAAST 95
           G    NN   +  H  + ++G+H      D    +   P  A++  +T
Sbjct: 262 GASNNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTT 309


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 8   HFQDKAHIYKFRTTTFGPSVYRAI 31
           HF+  A   KF +  FG ++ R I
Sbjct: 445 HFKQIARAVKFTSKLFGRALSRRI 468


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/30 (30%), Positives = 14/30 (46%)

Query: 121 SSVSTHRRLRAVLATITQHSAQFRLTANFE 150
           S +  H   R ++    Q  A ++LT N E
Sbjct: 331 SDIPLHDATRDLVLMSEQFEADYKLTRNLE 360


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.129    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,447
Number of Sequences: 429
Number of extensions: 2248
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 185
length of database: 140,377
effective HSP length: 54
effective length of query: 131
effective length of database: 117,211
effective search space: 15354641
effective search space used: 15354641
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 41 (20.6 bits)