Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002598-TA|BGIBMGA002598-PA|undefined
(234 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43279-1|AAB08981.1| 322|Homo sapiens nup 36 protein. 33 1.1
BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein pr... 30 8.0
BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein pr... 30 8.0
AK126804-1|BAC86701.1| 969|Homo sapiens protein ( Homo sapiens ... 30 8.0
AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein. 30 8.0
AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein. 30 8.0
AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein. 30 8.0
AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein. 30 8.0
>U43279-1|AAB08981.1| 322|Homo sapiens nup 36 protein.
Length = 322
Score = 32.7 bits (71), Expect = 1.1
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 17 TSHGVSTKLNFSGEETSAVTNSSKAEDEDVE-VKHTIIVSTKLRNNNRRGIHGFDDDRGV 75
+ G ST + + E+S + ++ D D +KH +I + N N I+ DD+
Sbjct: 39 SDRGSSTSNSITDPESSYLNSNDLLFDPDRRYLKHLVIKN----NKNLNVINHNDDEASK 94
Query: 76 IKTLSYDNNNKRKDDSGEVPIIAGYKAVETTQIRAPDTRYKNTEYPEST 124
+K +++ + KDD I A + T + +P T K+ ++ EST
Sbjct: 95 VKLVTFTTESASKDDQASSSIAA---SKLTEKAHSPQTDLKD-DHDEST 139
>BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein
protein.
Length = 1175
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 55 STKLRNNNRRGIHGFDDDRGVIKTLSYDNNNKRK-DDSGEVPIIAGYKAVETTQIRAPDT 113
S +L++ + D R V ++L D++NK+K DD GE G + +++R P+T
Sbjct: 790 SPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERHRG----DQSRVRRPET 845
Query: 114 RYKNTEYPESTLVNRNIRDQYDLYPSVAMNPSQWRPSS 151
++ + + D+ + S+ RPSS
Sbjct: 846 LRSSSRNEHGIKSDSSKTDKLERKHRHESGDSRERPSS 883
>BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein
protein.
Length = 1175
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 55 STKLRNNNRRGIHGFDDDRGVIKTLSYDNNNKRK-DDSGEVPIIAGYKAVETTQIRAPDT 113
S +L++ + D R V ++L D++NK+K DD GE G + +++R P+T
Sbjct: 790 SPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERHRG----DQSRVRRPET 845
Query: 114 RYKNTEYPESTLVNRNIRDQYDLYPSVAMNPSQWRPSS 151
++ + + D+ + S+ RPSS
Sbjct: 846 LRSSSRNEHGIKSDSSKTDKLERKHRHESGDSRERPSS 883
>AK126804-1|BAC86701.1| 969|Homo sapiens protein ( Homo sapiens
cDNA FLJ44854 fis, clone BRACE3052410, highly similar
to Homo sapiens IDN3 protein (IDN3). ).
Length = 969
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 55 STKLRNNNRRGIHGFDDDRGVIKTLSYDNNNKRK-DDSGEVPIIAGYKAVETTQIRAPDT 113
S +L++ + D R V ++L D++NK+K DD GE G + +++R P+T
Sbjct: 658 SPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERHRG----DQSRVRRPET 713
Query: 114 RYKNTEYPESTLVNRNIRDQYDLYPSVAMNPSQWRPSS 151
++ + + D+ + S+ RPSS
Sbjct: 714 LRSSSRNEHGIKSDSSKTDKLERKHRHESGDSRERPSS 751
>AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.
Length = 2697
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 55 STKLRNNNRRGIHGFDDDRGVIKTLSYDNNNKRK-DDSGEVPIIAGYKAVETTQIRAPDT 113
S +L++ + D R V ++L D++NK+K DD GE G + +++R P+T
Sbjct: 790 SPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERHRG----DQSRVRRPET 845
Query: 114 RYKNTEYPESTLVNRNIRDQYDLYPSVAMNPSQWRPSS 151
++ + + D+ + S+ RPSS
Sbjct: 846 LRSSSRNEHGIKSDSSKTDKLERKHRHESGDSRERPSS 883
>AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.
Length = 2804
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 55 STKLRNNNRRGIHGFDDDRGVIKTLSYDNNNKRK-DDSGEVPIIAGYKAVETTQIRAPDT 113
S +L++ + D R V ++L D++NK+K DD GE G + +++R P+T
Sbjct: 790 SPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERHRG----DQSRVRRPET 845
Query: 114 RYKNTEYPESTLVNRNIRDQYDLYPSVAMNPSQWRPSS 151
++ + + D+ + S+ RPSS
Sbjct: 846 LRSSSRNEHGIKSDSSKTDKLERKHRHESGDSRERPSS 883
>AB019602-1|BAA77349.1| 2158|Homo sapiens IDN3-B protein.
Length = 2158
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 55 STKLRNNNRRGIHGFDDDRGVIKTLSYDNNNKRK-DDSGEVPIIAGYKAVETTQIRAPDT 113
S +L++ + D R V ++L D++NK+K DD GE G + +++R P+T
Sbjct: 251 SPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERHRG----DQSRVRRPET 306
Query: 114 RYKNTEYPESTLVNRNIRDQYDLYPSVAMNPSQWRPSS 151
++ + + D+ + S+ RPSS
Sbjct: 307 LRSSSRNEHGIKSDSSKTDKLERKHRHESGDSRERPSS 344
>AB019494-1|BAA77335.1| 2265|Homo sapiens IDN3 protein.
Length = 2265
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Query: 55 STKLRNNNRRGIHGFDDDRGVIKTLSYDNNNKRK-DDSGEVPIIAGYKAVETTQIRAPDT 113
S +L++ + D R V ++L D++NK+K DD GE G + +++R P+T
Sbjct: 251 SPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERHRG----DQSRVRRPET 306
Query: 114 RYKNTEYPESTLVNRNIRDQYDLYPSVAMNPSQWRPSS 151
++ + + D+ + S+ RPSS
Sbjct: 307 LRSSSRNEHGIKSDSSKTDKLERKHRHESGDSRERPSS 344
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.313 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,606,408
Number of Sequences: 224733
Number of extensions: 1371304
Number of successful extensions: 2353
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2353
Number of HSP's gapped (non-prelim): 8
length of query: 234
length of database: 73,234,838
effective HSP length: 88
effective length of query: 146
effective length of database: 53,458,334
effective search space: 7804916764
effective search space used: 7804916764
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 64 (29.9 bits)
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