Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002597-TA|BGIBMGA002597-PA|IPR003306|WIF,
IPR008266|Tyrosine protein kinase, active site, IPR000719|Protein
kinase, IPR001245|Tyrosine protein kinase, IPR002290|Serine/threonine
protein kinase, IPR011009|Protein kinase-like
         (515 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.   106   4e-25
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    56   5e-10
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    56   5e-10
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    44   2e-06
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    37   3e-04
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                36   6e-04
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    31   0.017

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score =  106 bits (255), Expect = 4e-25
 Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 18/271 (6%)

Query: 233 VRLRSVAMEGTFGRVYRGTYA--DEEAREQEVLVKTVAEHASQVQVSLLLQEGCMLYGLH 290
           + + ++   G FG V RG      +   E +V +KT+   ++    +  L E  ++    
Sbjct: 633 ITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDFLTEASIMGQFE 692

Query: 291 HERVLSVLGVSIEDQTAPFLLYPWDAGWRNMKLFLLACRGVTIXXXXXXXXXXXLTTQHV 350
           H  V+ + GV  +      +    + G  ++  FL A  G                   +
Sbjct: 693 HPNVIFLQGVVTKSNPVMIITEFMENG--SLDTFLRANDG-------------KFQVLQL 737

Query: 351 VRMALHALDGLLYLHSQHVLHKDIAARNCIVDENLRVMIADNALSRDLFPADYHCLGDNE 410
           V M      G+ YL   + +H+D+AARN +V+  L   IAD  LSR++  A         
Sbjct: 738 VGMLRGIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRG 797

Query: 411 NR-PIKWLALEALTKRQFSPAADVWALGVLLWELTTLAHQPYAEVDPFEVAAYLRDGYRL 469
            + P++W A EA+  R+F+ A+DVW++G++ WE+ +   +PY      +V   +  GYRL
Sbjct: 798 GKIPVRWTAPEAIAFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRL 857

Query: 470 QQPANCPDELFAVMAYCWAMSPDDRPTLPQL 500
             P +CP+ ++ +M  CW      RPT   L
Sbjct: 858 PAPMDCPEAIYQLMLDCWQKERTHRPTFANL 888


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 56.4 bits (130), Expect = 5e-10
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)

Query: 351 VRMALHALDGLLYLHSQHVLHKDIAARNCIVDENLRVMIADNALSRDLFPADYHCLGDNE 410
           +++AL  L+G+ YLHSQ ++H+D+  +N ++D   R  + D          +   LG   
Sbjct: 700 IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC----ITEVMMLGSIV 755

Query: 411 NRPIKWLALEALTKRQFSPAADVWALGVLLWELTT-LAHQPYA--EVDPFEV------AA 461
             P+  +A E L+   +  + DV+A G+L W L       PY   +    E+       A
Sbjct: 756 GTPVH-MAPELLS-GHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKA 813

Query: 462 YLRDGYRLQQPANCPDELFAVMAYCWAMSPDDRPTL 497
            +  G R ++  +  DE + +M  CW+  P  RP L
Sbjct: 814 LMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLL 849


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 56.4 bits (130), Expect = 5e-10
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 15/156 (9%)

Query: 351 VRMALHALDGLLYLHSQHVLHKDIAARNCIVDENLRVMIADNALSRDLFPADYHCLGDNE 410
           +++AL  L+G+ YLHSQ ++H+D+  +N ++D   R  + D          +   LG   
Sbjct: 738 IQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC----ITEVMMLGSIV 793

Query: 411 NRPIKWLALEALTKRQFSPAADVWALGVLLWELTT-LAHQPYA--EVDPFEV------AA 461
             P+  +A E L+   +  + DV+A G+L W L       PY   +    E+       A
Sbjct: 794 GTPVH-MAPELLS-GHYDSSVDVYAFGILFWYLCAGHVRLPYTFEQFHNKELLWTSVKKA 851

Query: 462 YLRDGYRLQQPANCPDELFAVMAYCWAMSPDDRPTL 497
            +  G R ++  +  DE + +M  CW+  P  RP L
Sbjct: 852 LMIVGIRPERLPSFDDECWRLMEQCWSGEPSKRPLL 887


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 44.4 bits (100), Expect = 2e-06
 Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 346 TTQHVVRMALHALDGLLYLHSQHVLHKDIAARNCIVDENLRVMIADNALSRDLFPADYHC 405
           TT+      + A D   YLHS++++++D+   N ++D    V + D   ++ L   D+  
Sbjct: 467 TTRFYTACVVEAFD---YLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRL---DHGR 520

Query: 406 LGDNENRPIKWLALEALTKRQFSPAADVWALGVLLWELTTLAHQPYAEVDPFE 458
                    +++A E +  +    +AD W+LGVL++EL T    P+   DP +
Sbjct: 521 KTWTFCGTPEYVAPEVILNKGHDISADYWSLGVLMFELLT-GTPPFTGGDPMK 572


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 37.1 bits (82), Expect = 3e-04
 Identities = 26/112 (23%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 358 LDGLLYLHSQHVLHKDIAARNCIVDENLR---VMIADNALSRDLFPADYHCLGDNENRPI 414
           L+ + + H   V+H+D+   N ++    +   V +AD  L+ ++        G     P 
Sbjct: 19  LESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGF-AGTP- 76

Query: 415 KWLALEALTKRQFSPAADVWALGVLLWELTTLAHQPYAEVDPFEVAAYLRDG 466
            +L+ E L K  +    D+WA GV+L+ +  + + P+ + D   + A ++ G
Sbjct: 77  GYLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKTG 127


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 36.3 bits (80), Expect = 6e-04
 Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 9/140 (6%)

Query: 361 LLYLHSQHVLHKDIAARNCIVDENLRVMIADNALSRDLFPADYHCLGDNENRPIKWLALE 420
           L + H+  ++H D+  +N ++ +N +  + D   S  L  A      D       + A E
Sbjct: 168 LQFCHNAGIVHADVKPKNILMSKNGQPKLTDFG-SSVLIGAPNEI--DKFYGTPGYTAPE 224

Query: 421 ALTKRQFSPAADVWALGVLLWELTTLAHQPYAEVDPFEVAAYLRDGYRLQQPANCPDEL- 479
            + + + +PAAD+++LG++ W++      P+A +    +      G+R     N  DE  
Sbjct: 225 VIKQNRPTPAADIYSLGIVAWQM-LFRKLPFAGLHSHTIIYLSAKGHR-PIDDNIDDEFK 282

Query: 480 ---FAVMAYCWAMSPDDRPT 496
                +    W+ +  +RPT
Sbjct: 283 GTYKTLYKQMWSQNITERPT 302


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 31.5 bits (68), Expect = 0.017
 Identities = 11/43 (25%), Positives = 26/43 (60%)

Query: 360 GLLYLHSQHVLHKDIAARNCIVDENLRVMIADNALSRDLFPAD 402
           GL +LH + ++++D+   N ++D++  + IAD  + ++    D
Sbjct: 97  GLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCKEGISGD 139


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.135    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,918
Number of Sequences: 429
Number of extensions: 5041
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 9
length of query: 515
length of database: 140,377
effective HSP length: 61
effective length of query: 454
effective length of database: 114,208
effective search space: 51850432
effective search space used: 51850432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)