GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002595-TA|BGIBMGA002595-PA|undefined
         (174 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.6  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   7.4  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query: 103 SSCAIRDKSFGIPIKYTVHL 122
           +SC   + +FG  + YT+H+
Sbjct: 471 NSCQYCNIAFGDAVLYTIHM 490


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/21 (28%), Positives = 13/21 (61%)

Query: 27  YRKELYHSVDGTVETDGLRHL 47
           +R+ +Y  +   ++T G+ HL
Sbjct: 110 FRRSIYLQIKERLKTQGISHL 130


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,267
Number of Sequences: 317
Number of extensions: 1691
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 174
length of database: 114,650
effective HSP length: 53
effective length of query: 121
effective length of database: 97,849
effective search space: 11839729
effective search space used: 11839729
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 40 (20.2 bits)