GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002595-TA|BGIBMGA002595-PA|undefined
         (174 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X04132-1|CAA27747.1|  128|Drosophila melanogaster protein ( Dros...    28   8.0  
BT022480-1|AAY54896.1|  425|Drosophila melanogaster IP11783p pro...    28   8.0  
AE014297-4368|AAF56886.1|  442|Drosophila melanogaster CG14506-P...    28   8.0  

>X04132-1|CAA27747.1|  128|Drosophila melanogaster protein (
           Drosophila retrotransposon412 genome. ).
          Length = 128

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 143 VFSKATPLPLEADYLLYYVSNLNTHE 168
           V+SKA  L  E D+LL Y   L TH+
Sbjct: 38  VWSKALKLHAELDHLLQYQQELKTHK 63


>BT022480-1|AAY54896.1|  425|Drosophila melanogaster IP11783p
           protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 32  YHSVDGTVETDGLRHLLNNTTYSKTPFCRNSYVKMAAVDSKLHL 75
           Y S  G +E   +R+ ++N  Y+   F R SY++  A++S  HL
Sbjct: 87  YFSKFGDLERVSVRNGMSNFNYAMVRFSRTSYME-HAIESNPHL 129


>AE014297-4368|AAF56886.1|  442|Drosophila melanogaster CG14506-PA
           protein.
          Length = 442

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 32  YHSVDGTVETDGLRHLLNNTTYSKTPFCRNSYVKMAAVDSKLHL 75
           Y S  G +E   +R+ ++N  Y+   F R SY++  A++S  HL
Sbjct: 104 YFSKFGDLERVSVRNGMSNFNYAMVRFSRTSYME-HAIESNPHL 146


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.323    0.137    0.413 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,502,657
Number of Sequences: 52641
Number of extensions: 327049
Number of successful extensions: 632
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 631
Number of HSP's gapped (non-prelim): 3
length of query: 174
length of database: 24,830,863
effective HSP length: 80
effective length of query: 94
effective length of database: 20,619,583
effective search space: 1938240802
effective search space used: 1938240802
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 59 (27.9 bits)