Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002594-TA|BGIBMGA002594-PA|IPR000850|Adenylate kinase,
IPR011769|Adenylate/cytidine kinase, N-terminal, IPR006259|Adenylate
kinase, subfamily, IPR007862|Adenylate kinase, lid region
(242 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces pomb... 274 7e-75
SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr 3... 85 1e-17
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 33 0.050
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 31 0.15
SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr 1|||Ma... 31 0.20
SPAC6B12.11 |drc1|sld1|DNA replication protein Drc1|Schizosaccha... 30 0.26
SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces... 29 0.61
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 29 0.81
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 28 1.1
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 28 1.4
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 27 1.9
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 27 3.3
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 27 3.3
SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase |Schi... 26 5.7
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 25 7.5
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 25 10.0
>SPAC4G9.03 |adk1||adenylate kinase Adk1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 274 bits (672), Expect = 7e-75
Identities = 126/210 (60%), Positives = 167/210 (79%), Gaps = 1/210 (0%)
Query: 18 GIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLV 77
G+R +L+GPPG+GKGTQAP +++KY + HL+TGDMLR++V+ ++LG+ KK+MD+G LV
Sbjct: 3 GMRLILVGPPGAGKGTQAPNIQKKYGIAHLATGDMLRSQVARQTELGKEAKKIMDQGGLV 62
Query: 78 SDEMVVDMI-DKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDS 136
SD++V MI D+ L+ PECKNGF+LDGFPRTV QAEKL LL + K L+ V+E ++D
Sbjct: 63 SDDIVTGMIKDEILNNPECKNGFILDGFPRTVVQAEKLTALLDELKLDLNTVLELQVDDE 122
Query: 137 LLVRRITGRLIHPPSGRSYHEEFHPPKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQ 196
LLVRRITGRL+HP SGRSYH EF+PPK PM DDVTGE LI+RSDDN +AL+KRL TYH Q
Sbjct: 123 LLVRRITGRLVHPGSGRSYHLEFNPPKVPMKDDVTGEPLIQRSDDNADALRKRLVTYHEQ 182
Query: 197 TVPLVDYYMRKGLHWRVDASKAADDVFNKI 226
T P+V++Y +KG VDA++ + V+ +I
Sbjct: 183 TTPVVEFYKKKGKWAAVDAAQKPEQVWEQI 212
>SPCC1795.05c |||uridylate kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 191
Score = 84.6 bits (200), Expect = 1e-17
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 35/205 (17%)
Query: 23 LLGPPGSGKGTQAPRLKEKY-CVCHLSTGDMLRAEVS-SGSDLGRRLKKVMDEGKLVSDE 80
+LG PG+GKGTQ RL EK+ H+S GD LR E + GS G +K+ + +GK+V E
Sbjct: 7 VLGGPGAGKGTQCDRLAEKFDKFVHISAGDCLREEQNRPGSKYGNLIKEYIKDGKIVPME 66
Query: 81 MVVDMIDKNLDQPECK--NGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDSLL 138
+ + +++ + + K + FL+DGFPR + Q E + + K AL F +
Sbjct: 67 ITISLLETKMKECHDKGIDKFLIDGFPREMDQCEGFEKSVCPAKFAL----YFRCGQETM 122
Query: 139 VRRITGRLIHPPSGRSYHEEFHPPKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQTV 198
++R+ R SGRS DDN+E++KKR TY ++
Sbjct: 123 LKRLIHR--GKTSGRS-------------------------DDNIESIKKRFVTYTKASM 155
Query: 199 PLVDYYMRKGLHWRVDASKAADDVF 223
P+V+Y + +DA + D VF
Sbjct: 156 PVVEYLKSQNRLITIDAEQDPDAVF 180
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 32.7 bits (71), Expect = 0.050
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 13/126 (10%)
Query: 12 PDEDPLGIRAVLLGPPGSGKGTQAPRLKEKYCVCHLS--TGDML----RAEVSSGSDLGR 65
PDE P + ++GPPG+GK T L +Y +S TG + + + +
Sbjct: 68 PDEAPPPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITGPITVVAGKKRRITFLECPN 127
Query: 66 RLKKVMDEGKLVSDEMVVDMIDKN----LDQPECKNGFLLDGFPRTVPQAEKLDDLLAKR 121
L ++D K+ ++V+ +ID N ++ E N G PR + L DL K
Sbjct: 128 DLSSMIDVAKIA--DLVLLLIDANFGFEMETMEFLNILAPHGMPRIMGVLTHL-DLFKKT 184
Query: 122 KTALDA 127
T +A
Sbjct: 185 STLREA 190
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 31.1 bits (67), Expect = 0.15
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 11 KPDEDPLGI-RAVLL-GPPGSGKGTQAPRLK--EKYCVCHLSTGD 51
KP D LG+ +AVLL GPPG GK T A + E Y V L+ D
Sbjct: 400 KPGPDGLGLYKAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASD 444
>SPAC4G9.12 |||gluconokinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 193
Score = 30.7 bits (66), Expect = 0.20
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 8 TKLKPDEDPLGIRAVLLGPPGSGKGTQAPRLKEK 41
T + P P V++GP GSGK T A + EK
Sbjct: 4 TPINPTNQPYKYVFVVIGPAGSGKTTMAKAVSEK 37
>SPAC6B12.11 |drc1|sld1|DNA replication protein
Drc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 30.3 bits (65), Expect = 0.26
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 35 APRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQP 93
+P L C S +MLR D G +K++ E + S ++D+++ QP
Sbjct: 183 SPNLLRVNAPCRKSLSEMLRELKDIEDDYGSNEEKILQEFESFSSSSSESLVDRDISQP 241
>SPBC21C3.02c |sds3||Sds3-like family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 491
Score = 29.1 bits (62), Expect = 0.61
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 4/99 (4%)
Query: 110 QAEKLDDLLA-KRKTALDAVIEFGIEDSLLVRRITGRLIHPPSGRSYHEEFHPPKKPMTD 168
QA + DD A KRK A DA++ E + L R+ G+ + + HEE +
Sbjct: 293 QAHEADDEKAIKRKEAFDALLNIETEFTFLRNRLYGKKL---LKLNEHEEMIQNETHERF 349
Query: 169 DVTGEALIKRSDDNVEALKKRLATYHAQTVPLVDYYMRK 207
+ + + +R DD V + L ++DY ++
Sbjct: 350 NACIDLITERRDDRVRLATENLMKQLGNIKNVMDYVTKQ 388
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 28.7 bits (61), Expect = 0.81
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 78 SDEMVVDMIDKNLDQPECKNGF--LLDGFPRTVP-QAEKLDDLLAKRKTALDAVIEFGIE 134
S VVD +NL+ E F L D + +P Q + + KR+ A+ ++E G E
Sbjct: 119 SRRTVVDEDSENLEGDEEDGSFSDLKDLYSNPMPAQTTPVSMRMTKRQRAIQGILEEGEE 178
Query: 135 DSLL 138
D LL
Sbjct: 179 DELL 182
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 28.3 bits (60), Expect = 1.1
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 16 PLGIRAVLLGPPGSGKGTQAPRL-KEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEG 74
P GI ++ GPPG+GK A + E L G + ++++ S+ L+K +E
Sbjct: 258 PRGI--LMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESE--SNLRKAFEEA 313
Query: 75 KLVSDEMV-VDMIDKNLDQPECKNG 98
+ S ++ +D ID + E NG
Sbjct: 314 EKNSPAIIFIDEIDSIAPKREKTNG 338
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 18 GIRAVLLGPPGSGKGTQAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLV 77
G+R G P AP EK TGD+ +E+S+ + + +D G +
Sbjct: 171 GVRKSKAGAPSDPSSVHAPSSLEKPA----GTGDLPSSEISTKAPASTTVSSSVDPGTIN 226
Query: 78 SDEMVVDMIDKN 89
D + D N
Sbjct: 227 EDSSMKDHTTSN 238
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 87 DKNLDQPECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVI-EFGIEDSLLVRRIT 143
++N +QP G GF R++PQ ++L ++ + L+ ++ + G D L + IT
Sbjct: 232 NENQEQPSNTVGDDPLGFLRSIPQFQQLRQIVQQNPQMLETILQQIGQGDPALAQAIT 289
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 26.6 bits (56), Expect = 3.3
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 34 QAPRLKEKYCVCHLSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMVVDMIDKNLDQP 93
+AP+L+EKY +C + T L + +G + VMDE + + ++ D L
Sbjct: 159 KAPKLREKYDMC-IGTPMRLVQAIQTGLSFEKVEFFVMDEADRLFEPGFIEQTDHILSAC 217
Query: 94 ECKNGFLLDGFPRTVPQAEKLDDLLAKRKTALDAVIEFGIEDS 136
N F T+P ++++ LAK T I G++D+
Sbjct: 218 TSSN-ICKSLFSATIP--SRVEE-LAKVVTVDPIRIIVGLKDA 256
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 148 HPPSGRSYHEEFHPPKKPMTDDVTGEALIKRSDDNVEAL--KKRLATYHAQTVPLVD 202
HPPS R F D+ GE ++ + +D + + KK L VPL D
Sbjct: 324 HPPSLRRSRRFFAKKSYNHVSDLDGEVIVMKKEDITDGVSTKKDLNDGDQNEVPLHD 380
>SPAC1296.01c ||SPAC22F3.01|phosphoacetylglucosamine mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 5.7
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 47 LSTGDMLRAEVSSGSDLGRRLKKVMDEGKLVSDEMV-VDMIDKNLDQPECKNGFLLDGFP 105
L TG ++ V + G K+ + K + ++ +++++ N+D PE N F
Sbjct: 211 LMTGKKIKGTVLIDAANGVGAAKIKELAKYIDPKLFPIEIVNDNIDNPELLNNSCGADFV 270
Query: 106 RT 107
RT
Sbjct: 271 RT 272
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 25.4 bits (53), Expect = 7.5
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 150 PSGRSYHEEFHPPKKPMTDDVTGEALIKRSDDNVEALKKRLATYHAQTVPLVDYYMRKG 208
P+ R+ ++ P +K + DD T +KRS NV + R +T+ +V+ KG
Sbjct: 67 PTVRTAIQKDSPRRKQIDDDQTPPKHLKRSFQNVTVVSPR----KKKTIDVVELPFTKG 121
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 25.0 bits (52), Expect = 10.0
Identities = 9/12 (75%), Positives = 11/12 (91%)
Query: 22 VLLGPPGSGKGT 33
V++GPPGSGK T
Sbjct: 6 VVVGPPGSGKST 17
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.136 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,124,992
Number of Sequences: 5004
Number of extensions: 47829
Number of successful extensions: 160
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 151
Number of HSP's gapped (non-prelim): 17
length of query: 242
length of database: 2,362,478
effective HSP length: 71
effective length of query: 171
effective length of database: 2,007,194
effective search space: 343230174
effective search space used: 343230174
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
- SilkBase 1999-2023 -