GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002591-TA|BGIBMGA002591-PA|IPR002290|Serine/threonine
protein kinase, IPR000719|Protein kinase, IPR011009|Protein
kinase-like, IPR008271|Serine/threonine protein kinase, active site,
IPR000194|ATPase, F1/V1/A1 complex, alpha/beta subunit,
nucleotide-binding, IPR005479|Carbamoyl-phosphate synthase L chain,
ATP-binding
         (1130 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    78   5e-16
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    73   2e-14
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                56   1e-09
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    44   9e-06
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    42   2e-05
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    36   0.002
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    36   0.002
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    27   0.86 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   2.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   2.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   2.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   2.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    25   3.5  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        24   6.1  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    24   8.0  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 77.8 bits (183), Expect = 5e-16
 Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 21/263 (7%)

Query: 732 LKQIGKGAYGCVKMAYRRSDRLLTVTKFILKEKIGPLFLVDGPDGKKVPLELSLLLTLKH 791
           L  +G G +G V++     D   +   F LK+ +    +V+    + +  E  ++     
Sbjct: 370 LATLGVGGFGRVELVQIAGD---SSRSFALKQ-MKKAQIVETRQQQHIMSEKRIMGEADC 425

Query: 792 PNIVSLVDVYENEKYFQMVMEKHGAGMDLFEFIERRPRMDEPLLSYIFRQVGQAVEYLHS 851
             +V L   +++ KY  M+ME    G +L+  +  +   D+    +    V +A +YLHS
Sbjct: 426 DFVVKLFKTFKDRKYLYMLMEACLGG-ELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHS 484

Query: 852 LNILHRXXXXXXXXXXXXFHVKLIDFGSATFMSKDSLFSTFYGTTEYCSPEVLAGNKYAG 911
            NI++R             +VKL+DFG A  +       TF GT EY +PEV+  NK   
Sbjct: 485 RNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVIL-NKGHD 543

Query: 912 PELEMWSMGITLYVLTFFVDPFS--DIEDT----IQG--PLTFPHLVSEDLEQLLRWMLC 963
              + WS+G+ ++ L     PF+  D   T    ++G   + FP  ++ +   L++  LC
Sbjct: 544 ISADYWSLGVLMFELLTGTPPFTGGDPMKTYNIILKGIDAIEFPRSITRNATALIK-KLC 602

Query: 964 KD-PANRC-----TITQLMSHPW 980
           +D PA R       I+++  H W
Sbjct: 603 RDNPAERLGYQKGGISEIQKHKW 625


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 72.5 bits (170), Expect = 2e-14
 Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 18/179 (10%)

Query: 836 SYIFRQVGQAVEYLHSLNILHRXXX---XXXXXXXXXFHVKLIDFGSATFMSKDS-LFST 891
           S+  +Q+ ++V + H   ++HR                 VKL DFG A  +  ++  +  
Sbjct: 12  SHCIQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFG 71

Query: 892 FYGTTEYCSPEVLAGNKYAGPELEMWSMGITLYVLTFFVDPFSDIEDTIQ-------GPL 944
           F GT  Y SPEVL    Y  P +++W+ G+ LY+L     PF D ED  +       G  
Sbjct: 72  FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWD-EDQHRLYAQIKTGSY 129

Query: 945 TFPH----LVSEDLEQLLRWMLCKDPANRCTITQLMSHPWIKQHVAIANYVF-HEIIDC 998
            +P      V+ + + L+  ML  +P+ R T ++ + HPWI Q   +A+ V   E +DC
Sbjct: 130 DYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASVVHRQETVDC 188


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 56.4 bits (130), Expect = 1e-09
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 14/153 (9%)

Query: 789 LKHPNIVSLVDVYENEKYFQMVMEKHGAGMDLFEFIERRPRMDEPLLSY-----IFRQVG 843
           LKH NIV ++ + +      + ME  G  +        + R+DE +L       I + + 
Sbjct: 114 LKHSNIVKVLMIEQGASLSLITMELCGTTL--------QNRLDEAILIKNERICILKSIT 165

Query: 844 QAVEYLHSLNILHRXXXXXXXXXXXXFHVKLIDFGSATFMSKDSLFSTFYGTTEYCSPEV 903
            A+++ H+  I+H                KL DFGS+  +   +    FYGT  Y +PEV
Sbjct: 166 CALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYTAPEV 225

Query: 904 LAGNKYAGPELEMWSMGITLYVLTFFVDPFSDI 936
           +  N+   P  +++S+GI  + + F   PF+ +
Sbjct: 226 IKQNR-PTPAADIYSLGIVAWQMLFRKLPFAGL 257


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 43.6 bits (98), Expect = 9e-06
 Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 8/158 (5%)

Query: 782 ELSLLLTLKHPNIVSLVDVYENEKYFQMVMEKHGAGMDLFEFIERRPRMDEPL-LSYIFR 840
           E S++   +HPN++ L  V        ++ E    G  L  F+       + L L  + R
Sbjct: 684 EASIMGQFEHPNVIFLQGVVTKSNPVMIITEFMENG-SLDTFLRANDGKFQVLQLVGMLR 742

Query: 841 QVGQAVEYLHSLNILHRXXXXXXXXXXXXFHVKLIDFGSATFM--SKDSLFSTFYG--TT 896
            +   ++YL  +N +HR               K+ DFG +  +  + +  ++T  G    
Sbjct: 743 GIASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPV 802

Query: 897 EYCSPEVLAGNKYAGPELEMWSMGITLY-VLTFFVDPF 933
            + +PE +A  K+     ++WSMGI  + V+++   P+
Sbjct: 803 RWTAPEAIAFRKFTSAS-DVWSMGIVCWEVMSYGERPY 839


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 42.3 bits (95), Expect = 2e-05
 Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 2/112 (1%)

Query: 785 LLLTLKHPNIVSLVDVYENEKYFQMVMEKHGAGMDLFEFIERRPRMDEPLLSYIFRQVGQ 844
           L L+ K P +V L   ++       VME    G DL   I++  +  EP+  +   ++  
Sbjct: 38  LALSTKPPFLVQLHSCFQTMDRLYFVMEYVNGG-DLMYQIQQCGKFKEPVAVFYASEIAI 96

Query: 845 AVEYLHSLNILHRXXXXXXXXXXXXFHVKLIDFGSA-TFMSKDSLFSTFYGT 895
            + +LH   I++R             H+K+ DFG     +S D    TF GT
Sbjct: 97  GLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCKEGISGDKTTKTFCGT 148


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 35.9 bits (79), Expect = 0.002
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 844 QAVEYLHSLNILHRXXXXXXXXXXXXFHVKLIDFGSATFMSKDSLFSTFYGTTEYCSPEV 903
           + + YLHS  ++HR               KL DFG    +++  +  +  GT  + +PE+
Sbjct: 708 EGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC--ITEVMMLGSIVGTPVHMAPEL 765

Query: 904 LAGNKYAGPELEMWSMGITLYVL 926
           L+G  +    +++++ GI  + L
Sbjct: 766 LSG--HYDSSVDVYAFGILFWYL 786


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 35.9 bits (79), Expect = 0.002
 Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 844 QAVEYLHSLNILHRXXXXXXXXXXXXFHVKLIDFGSATFMSKDSLFSTFYGTTEYCSPEV 903
           + + YLHS  ++HR               KL DFG    +++  +  +  GT  + +PE+
Sbjct: 746 EGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC--ITEVMMLGSIVGTPVHMAPEL 803

Query: 904 LAGNKYAGPELEMWSMGITLYVL 926
           L+G  +    +++++ GI  + L
Sbjct: 804 LSG--HYDSSVDVYAFGILFWYL 824


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated ion
            channel subunit protein.
          Length = 469

 Score = 27.1 bits (57), Expect = 0.86
 Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 1036 EVAVRSEEKNVSREEPKRSSVALHALSTADRDAHSDNY-SLRSSADILDISSKPVSDAAL 1094
            ++A +  +KN +  E  RS  +L   +T D+D  S NY ++ S    L+I S  + +   
Sbjct: 343  KLARKQFQKNTTGLERSRSWSSLDNTNTNDQDYSSQNYLTVHSFPSTLNIPSVKIDEDQK 402

Query: 1095 TDISS 1099
              I S
Sbjct: 403  CSIES 407


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 166 VTGRTLEGGCFPVCLWITKPD 186
           VTG T E G +PV  +I KP+
Sbjct: 335 VTGVTSEEGLYPVAEFIAKPE 355


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
            receptor 1 protein.
          Length = 843

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 1055 SVALHALSTADRDAHSDNYSL---RSSADILDISSKPVSDAALTDISSDAT 1102
            ++ +H L T  RD ++ N SL   R+S   LD+S    +D +   +   A+
Sbjct: 16   TIGVHILDTCGRDTYALNQSLHFVRASLSNLDMSVLECADRSAPRVKKTAS 66


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 933

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)

Query: 1055 SVALHALSTADRDAHSDNYSL---RSSADILDISSKPVSDAALTDISSDAT 1102
            ++ +H L T  RD ++ N SL   R+S   LD+S    +D +   +   A+
Sbjct: 106  TIGVHILDTCGRDTYALNQSLHFVRASLSNLDMSVLECADRSAPRVKKTAS 156


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 166 VTGRTLEGGCFPVCLWITKPD 186
           VTG T E G +PV  +I KP+
Sbjct: 335 VTGVTSEEGLYPVAEFIAKPE 355


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)

Query: 755 TVTKFILKEKIGPLFLVDGPDGK 777
           +VT+ +LK KIG +FL+   D K
Sbjct: 343 SVTESVLKSKIGQVFLITILDSK 365


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 24.2 bits (50), Expect = 6.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 412 SVYYTSQHSEVTPTGGTPR 430
           +V Y  QH+  +PTG +P+
Sbjct: 52  AVNYAQQHNSPSPTGSSPQ 70


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 10/30 (33%), Positives = 14/30 (46%)

Query: 269 ARNMTLSPVNNEDNPSASDTDDDSCGAFNG 298
           A    +  V+ +D+    D DDD   A NG
Sbjct: 381 ANGEAVGEVDEDDDDDGDDDDDDDVEAANG 410


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.132    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,103
Number of Sequences: 429
Number of extensions: 13934
Number of successful extensions: 29
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 17
length of query: 1130
length of database: 140,377
effective HSP length: 65
effective length of query: 1065
effective length of database: 112,492
effective search space: 119803980
effective search space used: 119803980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 49 (23.8 bits)