Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002590-TA|BGIBMGA002590-PA|IPR002100|Transcription
factor, MADS-box
(311 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 26 1.6
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 24 4.8
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 4.8
AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium transport... 24 4.8
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 24 6.3
AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical prote... 23 8.3
AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosens... 23 8.3
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 23 8.3
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 23 8.3
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 23 8.3
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 25.8 bits (54), Expect = 1.6
Identities = 19/76 (25%), Positives = 27/76 (35%)
Query: 96 EEFQMMMQRNQLNGSRVGVGVTGSNYNLPVSVPVGNYDQSLLQASPQMHTSISPRPSSSE 155
++ Q Q+ Q +GS G NY + P QAS Q S
Sbjct: 428 QQQQQQQQQQQQSGSATWSGSNTLNYTQSIQPPAHASGSHQQQASQQQSQYWPHGSGGSS 487
Query: 156 TDSVYPSGGMLEMSNG 171
+ V PSG + + G
Sbjct: 488 SAVVAPSGASVGNATG 503
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 24.2 bits (50), Expect = 4.8
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 9/63 (14%)
Query: 117 TGSNYNLPVSVPVGNYDQSLLQASPQMHTSISPRPSSSETDSVYPSGGMLEMSNGYPGSA 176
TG ++ P + PV YD S TSIS S E D+ S S+ P S+
Sbjct: 551 TGRGWSSPQASPVSGYDSS---------TSISSVCSGPEEDNASHSSASSHGSSDGPSSS 601
Query: 177 SPL 179
L
Sbjct: 602 EKL 604
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.2 bits (50), Expect = 4.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 118 GSNYNLPVSVPVGNYDQSLLQASPQMHTSISPRPSSSE 155
G Y P VP+ Q A P M + PRP S++
Sbjct: 215 GGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQ 252
>AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium
transport-like protein protein.
Length = 591
Score = 24.2 bits (50), Expect = 4.8
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 19 IFSSNNKLYQYASTDMDKVLLKYT-EYNEPHESLTNRNIIEALTKKEHKNG 68
I +++ KL+Q+ MDK + E EP ++R ++ K H+NG
Sbjct: 489 IEAASQKLHQWRQA-MDKFADRPAREKTEPASGASSRRRSKSFLSKSHRNG 538
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 23.8 bits (49), Expect = 6.3
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 72 PDSPEAEPEYNLTPRTEAKYSKIDEEFQMMMQRNQLNGSRVGVGV 116
P+ P EP T Y D ++Q+ + +LN ++ + V
Sbjct: 1044 PEEPPQEPLKEYTEEELDSYKLPDLQYQISILEEKLNANKPNLSV 1088
>AJ973474-1|CAJ01521.1| 191|Anopheles gambiae hypothetical protein
protein.
Length = 191
Score = 23.4 bits (48), Expect = 8.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 90 KYSKIDEEFQMMMQRNQLNGSRVGVGV 116
+Y + EE+ +Q NQ+ GS G GV
Sbjct: 117 EYHRRFEEYLRGLQFNQIGGSNGGSGV 143
>AJ697734-1|CAG26927.1| 191|Anopheles gambiae putative chemosensory
protein CSP5 protein.
Length = 191
Score = 23.4 bits (48), Expect = 8.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 90 KYSKIDEEFQMMMQRNQLNGSRVGVGV 116
+Y + EE+ +Q NQ+ GS G GV
Sbjct: 117 EYHRRFEEYLRGLQFNQIGGSNGGSGV 143
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 8.3
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 37 VLLKYTEYNEPHESLTNRNIIEALTKKEH 65
++ +YT++ EP +NR+ ++ + H
Sbjct: 531 IVFEYTDWTEPDNPNSNRDALDKMVGDYH 559
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 23.4 bits (48), Expect = 8.3
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 37 VLLKYTEYNEPHESLTNRNIIEALTKKEH 65
++ +YT++ EP +NR+ ++ + H
Sbjct: 531 IVFEYTDWTEPDNPNSNRDALDKMVGDYH 559
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 23.4 bits (48), Expect = 8.3
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 37 VLLKYTEYNEPHESLTNRNIIEALTKKEH 65
++ +YT++ EP +NR+ ++ + H
Sbjct: 417 IVFEYTDWTEPDNPNSNRDALDKMVGDYH 445
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.311 0.127 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 301,917
Number of Sequences: 2123
Number of extensions: 11220
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 10
length of query: 311
length of database: 516,269
effective HSP length: 64
effective length of query: 247
effective length of database: 380,397
effective search space: 93958059
effective search space used: 93958059
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 48 (23.4 bits)
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