GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002588-TA|BGIBMGA002588-PA|undefined
         (91 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5YR17 Cluster: Putative uncharacterized protein; n=1; ...    33   0.84 
UniRef50_A6RXQ9 Cluster: Putative uncharacterized protein; n=1; ...    31   5.9  
UniRef50_UPI0000DB784F Cluster: PREDICTED: similar to CG15701-PA...    30   7.8  
UniRef50_A5CN38 Cluster: Putative acetyltransferase; n=1; Clavib...    30   7.8  
UniRef50_A1VLK1 Cluster: KWG Leptospira repeat protein; n=1; Pol...    30   7.8  

>UniRef50_Q5YR17 Cluster: Putative uncharacterized protein; n=1;
           Nocardia farcinica|Rep: Putative uncharacterized protein
           - Nocardia farcinica
          Length = 600

 Score = 33.5 bits (73), Expect = 0.84
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 7   TVIRPRHSTEHLFTSFPVDQQVDVELRDKGRRGARALILEITFGDKSHTVIW 58
           + +RP  +T  L   + V +++D   RD   R AR L LE T  + +H + W
Sbjct: 426 STVRPVDNTRKLRAEYDVQRRIDGACRDSRHRVARVL-LECTTAEGTHELCW 476


>UniRef50_A6RXQ9 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 379

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 58  WPQAGIRESNPRPWAYKERKQWHHQV 83
           W     R   P PWAY  R++W  Q+
Sbjct: 258 WEPIATRSVRPPPWAYNLREEWKKQI 283


>UniRef50_UPI0000DB784F Cluster: PREDICTED: similar to CG15701-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG15701-PA - Apis mellifera
          Length = 407

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 11/43 (25%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 49  FGDKSHTVIWPQAGIRESNPRPWAYKERKQWHHQVSEKFSKSD 91
           F   ++ +I+   G+++ +   W  KE + WHH++++K +  D
Sbjct: 145 FHSANYNIIF--GGLQDGSISLWDLKEDEMWHHKITDKANNLD 185


>UniRef50_A5CN38 Cluster: Putative acetyltransferase; n=1;
           Clavibacter michiganensis subsp. michiganensis NCPPB
           382|Rep: Putative acetyltransferase - Clavibacter
           michiganensis subsp. michiganensis (strain NCPPB 382)
          Length = 188

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 18/61 (29%), Positives = 28/61 (45%)

Query: 2   RLNGETVIRPRHSTEHLFTSFPVDQQVDVELRDKGRRGARALILEITFGDKSHTVIWPQA 61
           R  G  V+  R  T+H+F S+P   +V+ + RD  R   R L+      +  +   WP  
Sbjct: 98  RGRGLGVLVVRALTDHVFGSYPHVTRVEAQTRDDNRAMRRVLVRAGFVKEAHYRDGWPVV 157

Query: 62  G 62
           G
Sbjct: 158 G 158


>UniRef50_A1VLK1 Cluster: KWG Leptospira repeat protein; n=1;
           Polaromonas naphthalenivorans CJ2|Rep: KWG Leptospira
           repeat protein - Polaromonas naphthalenivorans (strain
           CJ2)
          Length = 491

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%)

Query: 1   MRLNGETVIRPRHSTEHLFTSFPVDQQVDVELRDKGRRGARALILEITFGDKS 53
           + L GE VI+PR +  H   SF  +    V  +D G++GA     E  F DKS
Sbjct: 118 INLQGEWVIKPRFTAAH---SFAPNGLAVVTEKDTGKQGAINARGEWVFSDKS 167


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.319    0.133    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,771,601
Number of Sequences: 1657284
Number of extensions: 3655103
Number of successful extensions: 6480
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 6479
Number of HSP's gapped (non-prelim): 5
length of query: 91
length of database: 575,637,011
effective HSP length: 69
effective length of query: 22
effective length of database: 461,284,415
effective search space: 10148257130
effective search space used: 10148257130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)