GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002588-TA|BGIBMGA002588-PA|undefined
         (91 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   2.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    20   3.6  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    20   3.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   3.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   4.8  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    19   6.3  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    19   6.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    19   8.4  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 68  PRPWAYKE 75
           PRPW Y E
Sbjct: 215 PRPWIYNE 222


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 19  FTSFPVDQQVDVELRDKGRRGARALILEITFGDKSHTVIWP 59
           F  F   ++ DVE+++   R +  +I    FG + ++V  P
Sbjct: 114 FVDFFQGREQDVEIKEVFSRFSNDVIATAAFGIRVNSVQEP 154


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 6   ETVIRPRHSTEHLFTSFPVDQQVDVEL 32
           +T I   HST H  TS    + + ++L
Sbjct: 280 DTSIYTAHSTRHAATSAAARKGISLDL 306


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 7/24 (29%), Positives = 16/24 (66%)

Query: 20  TSFPVDQQVDVELRDKGRRGARAL 43
           T F   Q +D+ L++KG++ ++ +
Sbjct: 111 TLFTNLQYIDINLQNKGKKESKLM 134


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.8 bits (39), Expect = 4.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 6   ETVIRPRHSTEHLFTSFPVDQQ 27
           + V   RH T+   T+ P +QQ
Sbjct: 357 QKVAEERHKTDINITTVPSEQQ 378


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
          activity of ets genes protein.
          Length = 108

 Score = 19.4 bits (38), Expect = 6.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 67 NPRPWAYKERKQWHHQVSEK 86
          +PR W  +   QW + V+++
Sbjct: 35 DPRQWTREHVAQWINLVTQQ 54


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
          modulator protein.
          Length = 108

 Score = 19.4 bits (38), Expect = 6.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query: 67 NPRPWAYKERKQWHHQVSEK 86
          +PR W  +   QW + V+++
Sbjct: 35 DPRQWTREHVAQWINLVTQQ 54


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 19.0 bits (37), Expect = 8.4
 Identities = 5/14 (35%), Positives = 10/14 (71%)

Query: 74  KERKQWHHQVSEKF 87
           K++ +W  Q+ +KF
Sbjct: 90  KQKPEWWEQLQKKF 103


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.133    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,989
Number of Sequences: 317
Number of extensions: 679
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 91
length of database: 114,650
effective HSP length: 47
effective length of query: 44
effective length of database: 99,751
effective search space:  4389044
effective search space used:  4389044
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
S2: 37 (19.0 bits)