GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002587-TA|BGIBMGA002587-PA|IPR000323|Copper type II,
ascorbate-dependent monooxygenase, core, IPR000720|Peptidyl-glycine
alpha-amidating monooxygenase, IPR008977|PHM/PNGase F Fold
         (273 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            23   1.9  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.9  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   3.3  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   3.3  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   5.7  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.9  

>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 80  LQVHYMHRFPKGHTDNSGVFLKYTKAHMPRQAG 112
           ++V +  R P GH D+    +  T+++ P   G
Sbjct: 1   MRVKHPLRMPTGHLDDDDFVVVKTRSNSPEAGG 33


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 80  LQVHYMHRFPKGHTDNSGVFLKYTKAHMPRQAG 112
           ++V +  R P GH D+    +  T+++ P   G
Sbjct: 1   MRVKHPLRMPTGHLDDDDFVVVKTRSNSPEAGG 33


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 172 WTLLGKKNPQLPQMFY 187
           W + GK +P++P+  Y
Sbjct: 40  WMVAGKADPEMPKRMY 55


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query: 172 WTLLGKKNPQLPQMFY 187
           W + GK +P++P+  Y
Sbjct: 40  WMVAGKADPEMPKRMY 55


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 209 NSHEYVVKIGATNQDEMCNFYLMYWVENDTPL 240
           N ++  VK G    DE CN Y   +  ND  L
Sbjct: 489 NQNKCPVKRGNGRCDEECNTYACEFDGNDCSL 520


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/17 (35%), Positives = 11/17 (64%)

Query: 213 YVVKIGATNQDEMCNFY 229
           Y V +G+   +E+C F+
Sbjct: 285 YTVNLGSLGYNEICEFH 301


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.134    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,312
Number of Sequences: 317
Number of extensions: 3697
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 6
length of query: 273
length of database: 114,650
effective HSP length: 56
effective length of query: 217
effective length of database: 96,898
effective search space: 21026866
effective search space used: 21026866
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 42 (21.0 bits)