GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002587-TA|BGIBMGA002587-PA|IPR000323|Copper type II,
ascorbate-dependent monooxygenase, core, IPR000720|Peptidyl-glycine
alpha-amidating monooxygenase, IPR008977|PHM/PNGase F Fold
         (273 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   7.1  

>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 10  YGCSEPGSNDSVWNCG 25
           Y C EP  ++  W CG
Sbjct: 288 YHCREPDRSNLCWKCG 303


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.436 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,035
Number of Sequences: 2123
Number of extensions: 14595
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 1
length of query: 273
length of database: 516,269
effective HSP length: 63
effective length of query: 210
effective length of database: 382,520
effective search space: 80329200
effective search space used: 80329200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)