Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002586-TA|BGIBMGA002586-PA|IPR011701|Major facilitator
superfamily MFS_1
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1455 + 27230134-27231110,27231195-27231327,27231417-272315... 38 0.034
03_01_0502 - 3779551-3779562,3779863-3780012,3780129-3780172,378... 34 0.55
09_02_0221 + 5962606-5963197,5963711-5963837,5963994-5964100,596... 33 1.3
01_07_0024 - 40559423-40559863,40559959-40560192,40560546-405608... 32 1.7
03_01_0475 + 3656628-3656791,3656944-3657013,3657114-3657310,365... 32 2.2
02_05_1302 + 35567585-35567848,35568303-35568368,35568475-355685... 32 2.2
12_01_1076 + 11184047-11184270,11186178-11186352,11186554-111866... 31 2.9
05_07_0162 + 28090579-28091343 31 3.9
01_06_1719 - 39416586-39416600,39418718-39418951,39420192-39420290 31 5.1
06_03_1393 + 29846884-29847465 30 6.7
01_01_0854 + 6662533-6662652,6662727-6662996,6663118-6663171,666... 30 6.7
02_04_0230 + 21103524-21103746,21105393-21105661,21105845-211060... 30 8.9
02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142 30 8.9
>08_02_1455 +
27230134-27231110,27231195-27231327,27231417-27231501,
27233372-27233571
Length = 464
Score = 37.9 bits (84), Expect = 0.034
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 757 RNPNVYKQNHSAPKLAMAGLAQRN--NISQPILSEFDSRRRDSIPEEADEDKLMPPAKAP 814
R P+ Y Q S+ A AG + + ++SQP+ DS +P D PPA P
Sbjct: 61 RLPSPYPQIPSSSSAAAAGSSGHHARSLSQPLFFSLDS-----LPPLPYADLAAPPAIPP 115
Query: 815 TKTKSDHLPPPPSYDEAINEHRKS 838
+ S PPPP HR+S
Sbjct: 116 SPPSSSSDPPPPGLPPRKGGHRRS 139
>03_01_0502 -
3779551-3779562,3779863-3780012,3780129-3780172,
3780256-3780319,3780422-3780655,3780765-3780908,
3781027-3781221,3781447-3781522,3781689-3781788,
3781955-3781988,3782076-3782160,3782226-3782290,
3782380-3782478,3782810-3782875,3785485-3785721
Length = 534
Score = 33.9 bits (74), Expect = 0.55
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 50 VMYGATASLLPYLTIHMQSIGLTVPEISFVYLALPFTTFLSPPITGFLVDR----FGEYK 105
V YG A L LT ++Q++GL+ SF++L P + P G DR +G +
Sbjct: 63 VQYG-WALQLSLLTPYVQTLGLSHALTSFMWLCGPIAGMVVQPCVGLYSDRCTSKWGRRR 121
Query: 106 PVVITALIL 114
P ++T +L
Sbjct: 122 PYILTGCVL 130
>09_02_0221 +
5962606-5963197,5963711-5963837,5963994-5964100,
5964185-5964328,5964700-5964822,5964921-5965103,
5965540-5965718,5965797-5965823
Length = 493
Score = 32.7 bits (71), Expect = 1.3
Identities = 33/130 (25%), Positives = 48/130 (36%), Gaps = 8/130 (6%)
Query: 722 YEGSASKGDML---QSALEISNHHGKGHISNPVLSISIRNPNVYKQNHSAPKLAMAGLAQ 778
YE ++ +ML + S H S+ S R+ K N+ P A+ G A
Sbjct: 253 YEFRLAEEEMLLAQSKEAQASKHASSSTPSSRAPSAPQRSSFEQKTNYQTPASALYG-AY 311
Query: 779 RNNISQPILSEFDSRRRDSIP--EEADEDKLMPPAKAPTKTKSDHLPPPPSYDEAINEHR 836
+ SQ S + +D + E + K P K D +PPPPS +
Sbjct: 312 EGSSSQGSSSGYGEPPKDPVALMEFYMKKAAQEERKRPPKQSKDEMPPPPSLQAP--SSK 369
Query: 837 KSWHSDDSTP 846
K H D P
Sbjct: 370 KGHHMGDFIP 379
>01_07_0024 -
40559423-40559863,40559959-40560192,40560546-40560842,
40561048-40561230,40561534-40561590,40561851-40561937
Length = 432
Score = 32.3 bits (70), Expect = 1.7
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 101 FGEYKPVVITALILNAAFHHSLLLIPHQETPGVMPSAYVMRHP--ITNSVEIWWSPCPSR 158
+G PV+I+A++ A + SLLL+ PG++P P + + E+ + P
Sbjct: 93 YGLGLPVMISAVVFTA-YDLSLLLLTSGRDPGIIPRNAHPPEPEGLDGNAEVGSNQTPPM 151
Query: 159 ECPD-EDETVD--FVLDRCVDHCQLFKPP 184
P +D V+ V + D C L++PP
Sbjct: 152 RLPRVKDVVVNGITVKTKYCDTCMLYRPP 180
>03_01_0475 +
3656628-3656791,3656944-3657013,3657114-3657310,
3657409-3657484,3657794-3657877,3658247-3658326,
3658422-3658548,3658727-3658786,3658874-3658924,
3659013-3659171,3659296-3659428,3659545-3659717
Length = 457
Score = 31.9 bits (69), Expect = 2.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 55 TASLLPYLTIHMQSIGLTVPEISFVYLALPFTTFLSPPITGFLVDRFGEYK 105
+A YL + +Q IGL + + V L+ L + G ++DRFG +K
Sbjct: 36 SACWFTYLLLFLQEIGLAPRDAAIVMLSGQVADGLMTILAGEMIDRFGHFK 86
>02_05_1302 +
35567585-35567848,35568303-35568368,35568475-35568573,
35569028-35569061,35569147-35569246,35569738-35569813,
35569974-35570315,35570426-35570569,35570840-35571073,
35571149-35571212,35571297-35571340,35571431-35571601
Length = 545
Score = 31.9 bits (69), Expect = 2.2
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 59 LPYLTIHMQSIGLTVPEISFVYLALPFTTFLSPPITGFLVD----RFGEYKPVVITALIL 114
L LT ++Q++G+ SF++L P T F+ P G D ++G +P ++ ++
Sbjct: 80 LSLLTPYIQTLGIDHAMASFIWLCGPITGFVVQPCVGVWSDKCRSKYGRRRPFILAGCLM 139
>12_01_1076 +
11184047-11184270,11186178-11186352,11186554-11186637,
11186712-11186953,11187029-11187266,11187814-11187893,
11187968-11188052,11188148-11188279,11188358-11188471,
11189550-11189594,11189840-11189924,11190043-11190102,
11190178-11190317
Length = 567
Score = 31.5 bits (68), Expect = 2.9
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 770 KLAMAGLAQR-NNISQPILSEFDSRRRDSIPEEADEDKLMPPAKAPTKTKSDHL 822
KL+ GL + ++ S P LSEFD +I D DKL+ + AP +T+ + L
Sbjct: 258 KLSDFGLCKPLDSSSFPNLSEFDYAVGKNINPSMDGDKLLSSSAAPRRTQQEQL 311
>05_07_0162 + 28090579-28091343
Length = 254
Score = 31.1 bits (67), Expect = 3.9
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 153 SPCPSRECPDEDETVDFVLDRCVDHCQLFKPPESPFTKPSGDDEND-DLD 201
+P P R+ P++ + VDH PP P T+P+ DD+ D DLD
Sbjct: 77 TPPPHRQAPEKASRLPLWRFLMVDHGP--PPPPPPTTQPAADDDLDLDLD 124
>01_06_1719 - 39416586-39416600,39418718-39418951,39420192-39420290
Length = 115
Score = 30.7 bits (66), Expect = 5.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 644 DACEQDTESGEGDKMNSEPLRKDAETMVSLERLHMFTRLNPLG 686
D C+ D ES + +K P+R E + L R + T +P+G
Sbjct: 16 DPCDCDLESKKEEKKILSPIRPTDEAVRGLSRARLITDASPIG 58
>06_03_1393 + 29846884-29847465
Length = 193
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 783 SQPILSEFDSRRRDSIPEEADEDKLMPPAKAPTKTKSDHLPPPPS 827
SQP+L RRR SIP + D A APT +S PP S
Sbjct: 14 SQPLLLLLRHRRRPSIPRASSGDPSPTAADAPTDAQS--ATPPSS 56
>01_01_0854 +
6662533-6662652,6662727-6662996,6663118-6663171,
6663723-6663784,6663940-6664008,6664082-6664133,
6664287-6664460
Length = 266
Score = 30.3 bits (65), Expect = 6.7
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 471 GFIESYLFIYLKELGAPNFLLGITVTVGTLSSIPFLYGADAITARIGHVNVIIVAFFSHA 530
GF ++L I+ ELG F + + +I FL G A + ++V++ F +
Sbjct: 127 GFASAFLLIFFSELGDRTFFIAALLAARNSGAIIFL-GTFGALAVMTIISVVLGRAFHYV 185
Query: 531 ARLVGYSF 538
++ +SF
Sbjct: 186 DGIIPFSF 193
>02_04_0230 +
21103524-21103746,21105393-21105661,21105845-21106009,
21106081-21106203,21107261-21107473
Length = 330
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 237 EVHDDLGEPKEQLGI---EMERDEDDQVTDFRSRFGEKLLIT 275
EVHD +G +EQ+ E++R D+Q+ + + EKL IT
Sbjct: 227 EVHDAIGYTEEQISELKKEIQRTRDEQLANITNMVEEKLNIT 268
>02_03_0287 + 17320242-17320481,17323422-17324767,17325124-17325142
Length = 534
Score = 29.9 bits (64), Expect = 8.9
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 228 YNDAAFFLIEVHDDLGEPKEQLGIEMERDEDDQVTDFRSRFGEKLLITQG 277
Y F L + GE +L + ++ D+DD T FR + K ++ G
Sbjct: 265 YTHEQFDLHLYSSETGEWSTKLMVSVDADDDDDSTSFRFSYASKAIVVGG 314
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.138 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,821,253
Number of Sequences: 37544
Number of extensions: 1069713
Number of successful extensions: 2914
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2908
Number of HSP's gapped (non-prelim): 14
length of query: 847
length of database: 14,793,348
effective HSP length: 88
effective length of query: 759
effective length of database: 11,489,476
effective search space: 8720512284
effective search space used: 8720512284
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
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