GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002586-TA|BGIBMGA002586-PA|IPR011701|Major facilitator
superfamily MFS_1
         (847 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    29   0.51 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             27   2.1  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    27   2.7  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    27   2.7  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 29.1 bits (62), Expect = 0.51
 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 2/22 (9%)

Query: 153 SPCPSRECPDEDETVDFVLDRC 174
           S CP+  C DEDETVD V+  C
Sbjct: 969 SRCPA--CKDEDETVDHVMFHC 988


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 27.1 bits (57), Expect = 2.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)

Query: 147 SVEIWWSPCPSR 158
           +VE+WW P PSR
Sbjct: 224 TVEVWWEPVPSR 235


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 613 RYMGLIAFLGGILYGLLHYFWLRNISMTGIDDA 645
           R+ GL+  LGG L GL  Y  L ++ M+G+D++
Sbjct: 436 RFSGLVGALGGGLSGLGGYNGLPSV-MSGLDES 467


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 797  SIPEEADEDKLMPPAKAPTKTKS 819
            +IPE   E+ ++PPA A   TKS
Sbjct: 1525 AIPEANSEEDIVPPAPATATTKS 1547


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.138    0.419 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 845,110
Number of Sequences: 2123
Number of extensions: 34663
Number of successful extensions: 149
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 146
Number of HSP's gapped (non-prelim): 4
length of query: 847
length of database: 516,269
effective HSP length: 70
effective length of query: 777
effective length of database: 367,659
effective search space: 285671043
effective search space used: 285671043
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)