Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002585-TA|BGIBMGA002585-PA|undefined
         (63 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   2.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    19   3.5  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    19   4.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    19   6.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    19   6.1  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   6.1  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        18   8.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        18   8.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        18   8.1  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 33  AWIRLTTKQNCSGRHSYQSRPNR 55
           AW+ L   Q CS   +++ +P R
Sbjct: 560 AWMALKMIQACSHHLTHKGKPIR 582


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.4 bits (38), Expect = 3.5
 Identities = 10/34 (29%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 27  PAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNPG 60
           P +++ A I+LTT Q  +  +++ ++ + DL+ G
Sbjct: 430 PGIEI-ADIKLTTNQQRNILNTFWTKSDVDLSRG 462


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 41  QNCSGRHSYQSRPNRDLN 58
           Q+ S R+S + R +RD N
Sbjct: 225 QHTSSRYSRERRCSRDRN 242


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query: 15  VLSEMCEKVIRE 26
           VL  +CEKV ++
Sbjct: 408 VLGRLCEKVAKQ 419


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query: 15  VLSEMCEKVIRE 26
           VL  +CEKV ++
Sbjct: 446 VLGRLCEKVAKQ 457


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase
          protein.
          Length = 388

 Score = 18.6 bits (36), Expect = 6.1
 Identities = 6/12 (50%), Positives = 8/12 (66%)

Query: 23 VIREPAVDLKAW 34
          +  EP+V LK W
Sbjct: 18 IFEEPSVMLKIW 29


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/17 (29%), Positives = 13/17 (76%)

Query: 13 PDVLSEMCEKVIREPAV 29
          P++ S+ C+++ ++ AV
Sbjct: 39 PEIYSKECDEMKKDSAV 55


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/17 (29%), Positives = 13/17 (76%)

Query: 13 PDVLSEMCEKVIREPAV 29
          P++ S+ C+++ ++ AV
Sbjct: 39 PEIYSKECDEMKKDSAV 55


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 18.2 bits (35), Expect = 8.1
 Identities = 5/17 (29%), Positives = 13/17 (76%)

Query: 13 PDVLSEMCEKVIREPAV 29
          P++ S+ C+++ ++ AV
Sbjct: 39 PEIYSKECDEMKKDSAV 55


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.135    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,053
Number of Sequences: 429
Number of extensions: 728
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of query: 63
length of database: 140,377
effective HSP length: 43
effective length of query: 20
effective length of database: 121,930
effective search space:  2438600
effective search space used:  2438600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
S2: 35 (18.2 bits)