GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002585-TA|BGIBMGA002585-PA|undefined
         (63 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5C5P8 Cluster: Putative uncharacterized protein; n=1; ...    30   7.8  

>UniRef50_A5C5P8 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 407

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 14  DVLSEMCEKVIREPAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNPG 60
           ++L+E+ E   R PA DL  ++       C G    ++RP R L  G
Sbjct: 191 NLLNELAEMSCRAPASDLSGFLNFARNMKCLG--CEEARPKRQLTGG 235


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.135    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,634,895
Number of Sequences: 1657284
Number of extensions: 2264217
Number of successful extensions: 3496
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3496
Number of HSP's gapped (non-prelim): 1
length of query: 63
length of database: 575,637,011
effective HSP length: 43
effective length of query: 20
effective length of database: 504,373,799
effective search space: 10087475980
effective search space used: 10087475980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)