GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002585-TA|BGIBMGA002585-PA|undefined
         (63 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             21   4.2  
AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450 CY...    21   4.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         21   5.6  
AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical prote...    21   5.6  
AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.    20   9.8  

>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 4/38 (10%)

Query: 27 PAVDLKAWIRLTTKQNCSGRHSYQSRP----NRDLNPG 60
          P V ++ W ++  K N +G  SY  +     N DL+ G
Sbjct: 9  PYVYVQTWEKVNIKGNPNGTISYNQKRVYIFNEDLSGG 46


>AY062205-1|AAL58566.1|  154|Anopheles gambiae cytochrome P450
           CYP4C26 protein.
          Length = 154

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/13 (53%), Positives = 8/13 (61%)

Query: 41  QNCSGRHSYQSRP 53
           +NC GRH Y   P
Sbjct: 127 ENCHGRHPYAYIP 139


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 1/34 (2%)

Query: 1   MLKVGQCQKLQGPDVLSEMCEKVIRE-PAVDLKA 33
           +L V +C K  G   L E+C ++  + P+ D  A
Sbjct: 149 LLIVDECHKNYGRQELWEICARLTHQAPSSDRPA 182


>AJ438610-6|CAD27478.1|  226|Anopheles gambiae hypothetical protein
           protein.
          Length = 226

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 38  TTKQNCSGRHSYQSRPNRD 56
           +++Q CSG  S    PN D
Sbjct: 131 SSEQACSGSSSSSPEPNLD 149


>AJ302658-1|CAC35523.1|  145|Anopheles gambiae gSG7 protein protein.
          Length = 145

 Score = 19.8 bits (39), Expect = 9.8
 Identities = 13/48 (27%), Positives = 17/48 (35%)

Query: 16  LSEMCEKVIREPAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNPGPLD 63
           LS+ C K +     DL+A    +   NC     Y         P  LD
Sbjct: 81  LSDGCLKQMVARVTDLEASFYASFSYNCHDHDQYSMECLEAAEPKYLD 128


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.135    0.421 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,023
Number of Sequences: 2123
Number of extensions: 2133
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 63
length of database: 516,269
effective HSP length: 42
effective length of query: 21
effective length of database: 427,103
effective search space:  8969163
effective search space used:  8969163
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)