Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002585-TA|BGIBMGA002585-PA|undefined
(63 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-16|CAB60995.1| 418|Caenorhabditis elegans Hypothetical p... 26 3.8
Z81147-2|CAB03532.1| 372|Caenorhabditis elegans Hypothetical pr... 25 8.7
U39851-7|AAM81115.1| 668|Caenorhabditis elegans Proteasome regu... 25 8.7
U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome regu... 25 8.7
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 25 8.7
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 25 8.7
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 25 8.7
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 25 8.7
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 25 8.7
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 25 8.7
>Z49909-16|CAB60995.1| 418|Caenorhabditis elegans Hypothetical
protein C14A4.14 protein.
Length = 418
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 23 VIREPAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNPGPL 62
V+REP L+ +++ +Y +PNR +NP PL
Sbjct: 147 VVREPDGTLRT---ANPEEHDRMNRTYYQKPNRSVNPPPL 183
>Z81147-2|CAB03532.1| 372|Caenorhabditis elegans Hypothetical
protein T09E11.2 protein.
Length = 372
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 2 LKVGQCQKLQGPDVLSEMCEKVIREPAVDLKAWIRLTTKQNCSGRH-SYQSRPNRDLN 58
L + C+ G D+L + KV+++ V WI T + + H ++ N D+N
Sbjct: 218 LALEACRTCPGMDLLDKEDRKVVQKYFVFSNVWIESTWLYSLAKEHLETENNLNFDIN 275
>U39851-7|AAM81115.1| 668|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform a
protein.
Length = 668
Score = 24.6 bits (51), Expect = 8.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 13 PDVLSEMCEKVIREPAVDLKAW 34
PDV+ + EKV +P +D+K +
Sbjct: 575 PDVVRRLLEKVATDPNLDVKRY 596
>U39851-6|AAM81116.1| 965|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 2, isoform b
protein.
Length = 965
Score = 24.6 bits (51), Expect = 8.7
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 13 PDVLSEMCEKVIREPAVDLKAW 34
PDV+ + EKV +P +D+K +
Sbjct: 575 PDVVRRLLEKVATDPNLDVKRY 596
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 6 QCQKLQGPDVLSEMCEKVIREPAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNP 59
QCQ V++ VI EP+V A +Q+C + Q +P + P
Sbjct: 320 QCQSACQSPVVAPQIVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAP 373
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 6 QCQKLQGPDVLSEMCEKVIREPAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNP 59
QCQ V++ VI EP+V A +Q+C + Q +P + P
Sbjct: 321 QCQSACQSPVVAPQIVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAP 374
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 6 QCQKLQGPDVLSEMCEKVIREPAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNP 59
QCQ V++ VI EP+V A +Q+C + Q +P + P
Sbjct: 236 QCQSACQSPVVAPQIVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAP 289
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 6 QCQKLQGPDVLSEMCEKVIREPAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNP 59
QCQ V++ VI EP+V A +Q+C + Q +P + P
Sbjct: 236 QCQSACQSPVVAPQIVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAP 289
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 6 QCQKLQGPDVLSEMCEKVIREPAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNP 59
QCQ V++ VI EP+V A +Q+C + Q +P + P
Sbjct: 236 QCQSACQSPVVAPQIVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAP 289
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Query: 6 QCQKLQGPDVLSEMCEKVIREPAVDLKAWIRLTTKQNCSGRHSYQSRPNRDLNP 59
QCQ V++ VI EP+V A +Q+C + Q +P + P
Sbjct: 236 QCQSACQSPVVAPQIVTVILEPSVSQSAQCVPQCQQSCQQQCIQQQQPMQQCAP 289
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.135 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,703,978
Number of Sequences: 27539
Number of extensions: 52015
Number of successful extensions: 103
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 95
Number of HSP's gapped (non-prelim): 10
length of query: 63
length of database: 12,573,161
effective HSP length: 43
effective length of query: 20
effective length of database: 11,388,984
effective search space: 227779680
effective search space used: 227779680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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