GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002584-TA|BGIBMGA002584-PA|undefined
         (108 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   2.4  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    22   4.2  
AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    22   5.6  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         21   7.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         21   7.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    21   7.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    21   9.8  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)

Query: 13  RSRSDLILGSATAGEVASPGGARTS 37
           R + D   G+  +G V+SP G R S
Sbjct: 251 RKKGDAPFGAELSGGVSSPVGGRNS 275


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
          Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query: 1  MKQYTAKRVASLRSRSDLILGSATAGEVASPGGARTSGVA 40
          +K Y  K   SL      ++  + AG    PGGA   G A
Sbjct: 13 LKTYQDKAPRSLHGPGLSLVHPSKAGAATGPGGAIVVGRA 52


>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 16  SDLILGSATA-GEVASPGGARTSGVAALMAGATRGR 50
           S L+   AT   E    GG R  GV+ L+ G   GR
Sbjct: 108 SQLVQKVATVMQEYTQSGGVRPFGVSLLICGWDDGR 143


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 23  ATAGEVASPGGARTSGVAALMAGATRGRVPD 53
           AT G++ASP  A ++        +  G V D
Sbjct: 272 ATYGDIASPSSASSAMTTPATTSSPTGSVYD 302


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 23  ATAGEVASPGGARTSGVAALMAGATRGRVPD 53
           AT G++ASP  A ++        +  G V D
Sbjct: 272 ATYGDIASPSSASSAMTTPATTSSPTGSVYD 302


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 15/55 (27%), Positives = 22/55 (40%)

Query: 28  VASPGGARTSGVAALMAGATRGRVPDACGAIVTADTAQLSTKLAGLRRSQPPRIT 82
           V  P GA   G A  +A    G +P+   AI     A ++  +   + S  P  T
Sbjct: 656 VELPEGASIVGFADDLAILAAGTIPEHAAAIAEEAVAAVNNWMVQHKLSLAPEKT 710


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 26  GEVASPGGARTSGVAALMAGATRGRVPD 53
           GEV S GG    G +++  G   G + D
Sbjct: 732 GEVGSVGGGGGGGGSSVRDGNNGGELSD 759


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.125    0.345 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,522
Number of Sequences: 2123
Number of extensions: 1788
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 108
length of database: 516,269
effective HSP length: 56
effective length of query: 52
effective length of database: 397,381
effective search space: 20663812
effective search space used: 20663812
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)