GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002582-TA|BGIBMGA002582-PA|IPR011765|Peptidase M16,
N-terminal, IPR007863|Peptidase M16, C-terminal
         (423 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    27   0.40 
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    24   2.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    24   2.8  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   4.9  

>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 26.6 bits (56), Expect = 0.40
 Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 11  ISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSG----AATATVGLWIDA 66
           +SS+ N        +  K +L++  PT++T+   G   +   +G    A T TV  +I+ 
Sbjct: 254 VSSETNHNERSTPRSHAKPSLIDDEPTEVTIGGGGTTSSRRTTGSRAAATTTTVYQFIEE 313

Query: 67  GSRYETSKNNGVAHFL 82
             R   SK    A  L
Sbjct: 314 RQRISLSKERRAARTL 329


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 215 GSEIRVRDDSMPLAHVAIAVEGAGWTDADNIP 246
           GS++ +R+D  P   + +  +GA   D+D  P
Sbjct: 95  GSQLAMRNDRSPSYSMQVPQQGASIDDSDPDP 126


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)

Query: 215 GSEIRVRDDSMPLAHVAIAVEGAGWTDADNIP 246
           GS++ +R+D  P   + +  +GA   D+D  P
Sbjct: 543 GSQLAMRNDRSPSYSMQVPQQGASIDDSDPDP 574


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)

Query: 246 PLMVANTLIGAWDRSQGGGANNASYL 271
           P  +  +LI  +D+ QGGG    S++
Sbjct: 112 PTAIGLSLIKGFDKKQGGGIELISHI 137


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.134    0.397 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,259
Number of Sequences: 429
Number of extensions: 4397
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 4
length of query: 423
length of database: 140,377
effective HSP length: 60
effective length of query: 363
effective length of database: 114,637
effective search space: 41613231
effective search space used: 41613231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)