Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002580-TA|BGIBMGA002580-PA|undefined
(157 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 58 8e-10
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 36 0.003
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 30 0.19
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 29 0.43
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 29 0.43
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 28 0.57
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 28 0.57
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 28 0.75
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 0.75
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 27 0.99
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 27 0.99
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 27 1.3
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 1.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 1.7
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 27 1.7
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 27 1.7
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 26 2.3
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 26 2.3
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 3.0
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 25 5.3
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 24 9.3
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 24 9.3
SPAC227.14 |||nicotinamide riboside kinase|Schizosaccharomyces p... 24 9.3
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 24 9.3
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 24 9.3
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 24 9.3
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 24 9.3
SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces... 24 9.3
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 57.6 bits (133), Expect = 8e-10
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 22 EDDEMG-VMGDSPENLTLAWKDLSVFRKKKIHTSMWRSAVY------EEVKVLHXXXXXX 74
+D + G V+ +SP+N K+ K S WR+ Y E ++L+
Sbjct: 850 QDTQGGDVVKESPDNEEELNKEYEGIEKGHDIFS-WRNLNYDIQIKGEHRRLLNGVQGFV 908
Query: 75 XXXNLVALMGSSGAGKTTLLAAISRR-DKSALTGYLMLNGRLAGAD-LIARISGFVPQED 132
L ALMG SGAGKTTLL +++R D +TG +++NGR G D R +G+V Q+D
Sbjct: 909 VPGKLTALMGESGAGKTTLLNVLAQRVDTGVVTGDMLVNGR--GLDSTFQRRTGYVQQQD 966
Query: 133 LAIEDLTVAEHMEF 146
+ I + TV E + F
Sbjct: 967 VHIGESTVREALRF 980
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 35.9 bits (79), Expect = 0.003
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 34 ENLTLAWKDLSVFRKKKIHTSMWRSAVYEEVKVLHXXXXXXXXXNLVALMGSSGAGKTTL 93
+NL L W+DL+ K TS + ++L L AL+G + +GK+ L
Sbjct: 754 DNLVLCWRDLNFTVVTK--TS--------KKQILTNVSGYLKKNTLTALLGENKSGKSVL 803
Query: 94 LAAISRRD-KSALTGYLMLNGRLAGADLIARISGFVPQEDLAIEDLTVAE 142
L +S+R ++ G + L+G +L RI G+V + L I + TV E
Sbjct: 804 LRILSQRGIAGSVEGEITLSGLKNPKNLRKRI-GYVRKNPLFISEYTVRE 852
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.9 bits (64), Expect = 0.19
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 63 EVKVLHXXXXXXXXXNLVALMGSSGAGKTTLLAAISRRDKSALTGYLMLNGR 114
EV VL + AL+G+SG+GK+T++ + R + G + L+G+
Sbjct: 434 EVLVLDNFSLVCPSGKITALVGASGSGKSTIIGLV-ERFYDPIGGQVFLDGK 484
Score = 29.1 bits (62), Expect = 0.33
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 64 VKVLHXXXXXXXXXNLVALMGSSGAGKTTLLAAISR 99
+KVL VA +GSSG GK+T + I R
Sbjct: 1134 IKVLRGLNLTVKPGQFVAFVGSSGCGKSTTIGLIER 1169
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 28.7 bits (61), Expect = 0.43
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 58 SAVYEEVKVLHXXXXXXXXXNLVALMGSSGAGKTTLLAAI 97
+ VY KVL AL GS+G+GKTTLLA +
Sbjct: 271 NCVYWGRKVLSDINWTIREGERWALTGSNGSGKTTLLAYV 310
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 28.7 bits (61), Expect = 0.43
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 82 LMGSSGAGKTTLLAAISRRDKSALTGYLMLN 112
L G +G GK+TLL A+SRR+ + T +L+
Sbjct: 213 LTGRNGIGKSTLLRALSRREIAIPTHITILH 243
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 28.3 bits (60), Expect = 0.57
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 80 VALMGSSGAGKTTLLAAISRRDKSALTGYLMLNG----RLAGADLIARISGFVPQEDLAI 135
+ ++G +GAGK+TL A+ R + +G + L+ + DL +R++ +PQE+ A
Sbjct: 1254 IGIVGRTGAGKSTLTLALFRLIEPT-SGDIQLDDINITSIGLHDLRSRLA-IIPQENQAF 1311
Query: 136 EDLTVAEHME 145
E T+ E+++
Sbjct: 1312 EG-TIRENLD 1320
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 28.3 bits (60), Expect = 0.57
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 80 VALMGSSGAGKTTLLAAISRRDKSALTGYLMLNGRLAGADL--IARISGFVPQEDLAIED 137
VA +G+SG GK+T+L + R + L+ N RL L + + G VPQ+ D
Sbjct: 472 VAFVGASGCGKSTILRLLFRFYDTDSGKILIDNQRLDQITLNSLRKAIGVVPQDTPLFND 531
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 27.9 bits (59), Expect = 0.75
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 82 LMGSSGAGKTTLLAAISRRDKSALTGYLMLNGR 114
L+G++GAGK+TLL +S + A G++ + G+
Sbjct: 35 LVGANGAGKSTLLKLLSGK-SLAKAGHISVGGK 66
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 27.9 bits (59), Expect = 0.75
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 79 LVALMGSSGAGKTTLLAAISRR 100
+VA+MG G GK+TL+ ++ RR
Sbjct: 76 IVAVMGPPGTGKSTLIKSLVRR 97
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 27.5 bits (58), Expect = 0.99
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 6/58 (10%)
Query: 80 VALMGSSGAGKTTLLAAISRRDKSALTGYLMLNGR-LAGADLIA---RISGFVPQEDL 133
VA++G +G+GK+TL + R ++G + +NGR +L A RIS F+PQ+ +
Sbjct: 1242 VAVVGRTGSGKSTLGLTL-LRFTHRISGEIYINGRETQSVNLNALRQRIS-FIPQDPI 1297
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.5 bits (58), Expect = 0.99
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 80 VALMGSSGAGKTTLLAAI 97
VAL+G +GAGKTTL+ I
Sbjct: 623 VALVGPNGAGKTTLIKLI 640
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 27.1 bits (57), Expect = 1.3
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 42 DLSVFRKKKIHTSMWRSAVYEEVK-VLHXXXXXXXXXNLVALMGSSGAGKTTLLAAISR 99
DL V + K I + + S Y+ K VL ++AL+G SG GK+T++ + R
Sbjct: 576 DLKVTQGKVIFSHV--SFAYDPRKPVLSDINFVAQPGKVIALVGESGGGKSTIMRILLR 632
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.1 bits (57), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 78 NLVALMGSSGAGKTTLLAAISRRDKSALTGYLMLNGRLAGADLIARISG 126
N AL+G +G GKT ++ ++ R M + R+ DL A ISG
Sbjct: 133 NNPALVGPAGVGKTAIMEGLASRIIRGEVPESMKDKRVIVLDLGALISG 181
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.6 bits (56), Expect = 1.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 80 VALMGSSGAGKTTLLAAISRRDKSALTGYLMLNGRLAG-ADLIARISGFVPQE 131
+ L GS G GKT+L+ A++R TG+ ++ L+ DL+ VP E
Sbjct: 1562 ILLEGSPGVGKTSLITALARE-----TGHQLVRINLSDQTDLMDLFGSDVPVE 1609
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.6 bits (56), Expect = 1.7
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Query: 38 LAWKDLSVFRKKKIHTSMWRSAVYEEVKVLHXXXXXXXXXNLVALMGSSGAGKTTLLAAI 97
L +K+ F KK + ++S Y+ K+ +L+++ +TT L+
Sbjct: 968 LNYKNCISFWKKYLKDFKFKSLSYQREKM--GVVELSSNISLLSVENICKQLQTTPLSFF 1025
Query: 98 SRRDKSALTGYLMLNGRLAGADLIARISGFVPQEDLAI 135
+ L+ YL N L G + R++ +P D I
Sbjct: 1026 LTAWSTVLSSYLKTNDFLVGTVVSGRVNSLLPNVDYVI 1063
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.6 bits (56), Expect = 1.7
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 80 VALMGSSGAGKTTLLAAISRRDKSALTGY 108
VA +G GK+TLL+AI+ + KSA Y
Sbjct: 65 VAFIGFPSVGKSTLLSAIT-KTKSATASY 92
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 26.2 bits (55), Expect = 2.3
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 82 LMGSSGAGKTTLLAAISRRD 101
L+G +G+GK+T L +++ RD
Sbjct: 106 LLGDNGSGKSTFLESVAARD 125
Score = 24.6 bits (51), Expect = 7.0
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 80 VALMGSSGAGKTTLLAAIS 98
VA++G +G GK+TLL I+
Sbjct: 419 VAIVGKNGTGKSTLLNLIT 437
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 2.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 78 NLVALMGSSGAGKTTLLAAISRRDKS 103
N + L GS+G GKTTL I+ KS
Sbjct: 121 NSMILWGSAGTGKTTLARLIAVTTKS 146
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 3.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 80 VALMGSSGAGKTTLLAAISRRD 101
V ++G SG+GK+TL+ + RD
Sbjct: 98 VLVLGESGSGKSTLVNTLLNRD 119
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 25.0 bits (52), Expect = 5.3
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 80 VALMGSSGAGKTTLLAAI 97
VA++G +GAGK+TL+ +
Sbjct: 722 VAILGPNGAGKSTLIKVL 739
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 24.2 bits (50), Expect = 9.3
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 18 VVNWEDDEMGVMGDSPENLTLAWKDLSVFRKKKIHTSMWRSAVYEE 63
++N D ++ VM + + + A +LS+ +KK+ + VY++
Sbjct: 342 LINDLDHQISVMQNDEKRINNAKTELSLSLEKKLEAKKQKEKVYKD 387
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 24.2 bits (50), Expect = 9.3
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 80 VALMGSSGAGKTTLLAAISR 99
+ ++G +GAGK+TL A+ R
Sbjct: 1256 IGIVGRTGAGKSTLAMALFR 1275
>SPAC227.14 |||nicotinamide riboside kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 235
Score = 24.2 bits (50), Expect = 9.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 79 LVALMGSSGAGKTTLLAAISR 99
L+ L G G+GK+TL A +++
Sbjct: 31 LIGLAGGPGSGKSTLCAILAK 51
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 24.2 bits (50), Expect = 9.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 79 LVALMGSSGAGKTTLLAAISRRDKSALTGY 108
++ L+G++G GK+T L +S + K L Y
Sbjct: 105 VLGLVGTNGIGKSTALKILSGKMKPNLGRY 134
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 24.2 bits (50), Expect = 9.3
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 80 VALMGSSGAGKTTLLAAISRRDKSA---LTGYLMLN 112
VA++G SG+GK+TL+ + + S + GY + N
Sbjct: 1131 VAIVGISGSGKSTLVELLRKTYPSEDIYIDGYPLTN 1166
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 24.2 bits (50), Expect = 9.3
Identities = 8/19 (42%), Positives = 16/19 (84%)
Query: 80 VALMGSSGAGKTTLLAAIS 98
+A++G +GAGK+TL+ ++
Sbjct: 703 IAVIGPNGAGKSTLIKVLT 721
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 24.2 bits (50), Expect = 9.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 79 LVALMGSSGAGKTTLLAAISRRDKSALTGYLMLN 112
L ++G +G+GKTT++ + K A TG L N
Sbjct: 29 LTLIVGQNGSGKTTIIECL----KYATTGILPPN 58
>SPBC20F10.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 24.2 bits (50), Expect = 9.3
Identities = 14/23 (60%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 16 GAVVNWEDDEMGVMGDSPENLTL 38
GAVVN EDDE GV+G + + L L
Sbjct: 189 GAVVNSEDDE-GVVGCACQALGL 210
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.131 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,481
Number of Sequences: 5004
Number of extensions: 20260
Number of successful extensions: 123
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 89
Number of HSP's gapped (non-prelim): 39
length of query: 157
length of database: 2,362,478
effective HSP length: 67
effective length of query: 90
effective length of database: 2,027,210
effective search space: 182448900
effective search space used: 182448900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)
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