GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002580-TA|BGIBMGA002580-PA|undefined
         (157 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    53   5e-09
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    52   1e-08
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    52   1e-08
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    24   2.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   4.5  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    22   7.8  

>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 52.8 bits (121), Expect = 5e-09
 Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 21  WEDDEMG-VMGDSP--ENLTLAWKDLSVF-------RKKKIHTSMWRSAVYEEVK----- 65
           W+    G V G  P  E LT  WK++ VF       + ++   +  RS    + K     
Sbjct: 31  WKPKSYGSVKGQIPQCERLTYTWKEIDVFGEAPTDGKPREPLCTRLRSCCTRQRKDFNPR 90

Query: 66  --VLHXXXXXXXXXNLVALMGSSGAGKTTLLAAISRRD----KSALTGYLMLNGRLAGAD 119
             +L           L+A+MGSSGAGKTTLL A++ R     K +      LNG    A+
Sbjct: 91  KHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAE 150

Query: 120 LIARISGFVPQEDLAIEDLTVAEHMEFMFQIM 151
            +     +V Q+DL I  LT  EH+  +FQ M
Sbjct: 151 QLRARCAYVQQDDLFIPSLTTREHL--LFQAM 180


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 51.6 bits (118), Expect = 1e-08
 Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 21  WEDDEMG-VMGDSP--ENLTLAWKDLSVF-------RKKKIHTSMWRSAVYEEVK----- 65
           W+    G V G  P  E LT  WK++ VF       + ++   +  R+    + K     
Sbjct: 53  WKPKSYGSVKGQIPQCERLTYTWKEIDVFGEAPTDGKPREPLCTRLRNCCTRQRKDFNPR 112

Query: 66  --VLHXXXXXXXXXNLVALMGSSGAGKTTLLAAISRRD----KSALTGYLMLNGRLAGAD 119
             +L           L+A+MGSSGAGKTTLL A++ R     K +      LNG    A+
Sbjct: 113 KHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAE 172

Query: 120 LIARISGFVPQEDLAIEDLTVAEHMEFMFQIM 151
            +     +V Q+DL I  LT  EH+  +FQ M
Sbjct: 173 QLRARCAYVQQDDLFIPSLTTREHL--LFQAM 202


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 51.6 bits (118), Expect = 1e-08
 Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 23/152 (15%)

Query: 21  WEDDEMG-VMGDSP--ENLTLAWKDLSVF-------RKKKIHTSMWRSAVYEEVK----- 65
           W+    G V G  P  E LT  WK++ VF       + ++   +  R+    + K     
Sbjct: 53  WKPKSYGSVKGQIPQCERLTYTWKEIDVFGEAPTDGKPREPLCTRLRNCCTRQRKDFNPR 112

Query: 66  --VLHXXXXXXXXXNLVALMGSSGAGKTTLLAAISRRD----KSALTGYLMLNGRLAGAD 119
             +L           L+A+MGSSGAGKTTLL A++ R     K +      LNG    A+
Sbjct: 113 KHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPGVKISPNAVRALNGVPVNAE 172

Query: 120 LIARISGFVPQEDLAIEDLTVAEHMEFMFQIM 151
            +     +V Q+DL I  LT  EH+  +FQ M
Sbjct: 173 QLRARCAYVQQDDLFIPSLTTREHL--LFQAM 202


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 8/20 (40%), Positives = 10/20 (50%)

Query: 21  WEDDEMGVMGDSPENLTLAW 40
           W+D + G   D P N   AW
Sbjct: 145 WQDPKPGTERDPPNNWVAAW 164


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/17 (47%), Positives = 15/17 (88%)

Query: 82  LMGSSGAGKTTLLAAIS 98
           L+G +G+GK+ +LAA++
Sbjct: 112 LVGKNGSGKSAILAAMT 128


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)

Query: 55  MWRSAVYEEVKVLH 68
           +W+ A+ EE+K LH
Sbjct: 443 LWKRAMEEEIKSLH 456


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.131    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,512
Number of Sequences: 2123
Number of extensions: 4492
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 6
length of query: 157
length of database: 516,269
effective HSP length: 59
effective length of query: 98
effective length of database: 391,012
effective search space: 38319176
effective search space used: 38319176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)