GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002580-TA|BGIBMGA002580-PA|undefined
         (157 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.9  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   5.8  

>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 79  LVALMGSSGAGKTTLLAAI 97
           +V +MG    GKTTLL A+
Sbjct: 147 IVTIMGHVDHGKTTLLDAL 165


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 106 TGYLMLNGRLAGADLIARISGFVPQE 131
           T Y++L   ++G DL  R   F+P+E
Sbjct: 631 TTYILLKYPISGFDLEPRQKEFLPKE 656


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 82  LMGSSGAGKTTLLAAISRRDKSALTGYLMLNGRLAGADLI 121
           LM  S  G TT+L  I+ R + + +   ++   LA ADL+
Sbjct: 47  LMIISAIGNTTVLILITCRKRVSKSRIHIMLMHLAIADLL 86


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.131    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,028
Number of Sequences: 429
Number of extensions: 1164
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 157
length of database: 140,377
effective HSP length: 53
effective length of query: 104
effective length of database: 117,640
effective search space: 12234560
effective search space used: 12234560
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)