GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002579-TA|BGIBMGA002579-PA|undefined
         (115 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   0.19 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    25   0.19 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    25   0.19 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   5.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   5.4  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          19   9.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           19   9.4  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 25.0 bits (52), Expect = 0.19
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 32  PKANFGQRPAHVPVQSPFL 50
           P  NFG  PA +P+Q+P L
Sbjct: 178 PYPNFGVPPAGIPLQNPGL 196


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.19
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 63  LETLKNNIRHECENLSPEVLAEVLAEVMKNSIKRARKAVNCDGARLA 109
           L  + NN++ E E    ++LA  L  V+   +  +   V CD   +A
Sbjct: 258 LNFITNNLKSENEEFKEKLLAANLCLVIYTLVSVSLVMVTCDACTIA 304


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 25.0 bits (52), Expect = 0.19
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 63  LETLKNNIRHECENLSPEVLAEVLAEVMKNSIKRARKAVNCDGARLA 109
           L  + NN++ E E    ++LA  L  V+   +  +   V CD   +A
Sbjct: 258 LNFITNNLKSENEEFKEKLLAANLCLVIYTLVSVSLVMVTCDACTIA 304


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query: 70  IRHECENLSPEVLAEVL 86
           + H C+N+S EV+  +L
Sbjct: 268 LSHVCQNVSTEVIGNIL 284


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 65   TLKNNIRHECENLSPEVLAEVLAEVMKNS 93
            T+KNN+         + +++   EVM+NS
Sbjct: 1145 TVKNNVEDNYMEAPQDNVSQPSDEVMENS 1173


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 65   TLKNNIRHECENLSPEVLAEVLAEVMKNS 93
            T+KNN+         + +++   EVM+NS
Sbjct: 1145 TVKNNVEDNYMEAPQDNVSQPSDEVMENS 1173


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 60  VNKLETLKNNIRHECENLSPEVLAEVLAEVMKNSIKRARKAVNCDGA 106
           +NK+ T +++      +LSP+ +A   +      + R       D A
Sbjct: 148 MNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSA 194


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 10/47 (21%), Positives = 20/47 (42%)

Query: 60  VNKLETLKNNIRHECENLSPEVLAEVLAEVMKNSIKRARKAVNCDGA 106
           +NK+ T +++      +LSP+ +A   +      + R       D A
Sbjct: 139 MNKVSTPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSA 185


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.322    0.135    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,321
Number of Sequences: 317
Number of extensions: 964
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of query: 115
length of database: 114,650
effective HSP length: 49
effective length of query: 66
effective length of database: 99,117
effective search space:  6541722
effective search space used:  6541722
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)