Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002579-TA|BGIBMGA002579-PA|undefined
(115 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK124875-1|BAC85976.1| 212|Homo sapiens protein ( Homo sapiens ... 29 2.6
Z12173-1|CAA78164.1| 552|Homo sapiens N-acetylglucosamine-6-sul... 29 4.6
BX537363-1|CAD97608.1| 496|Homo sapiens hypothetical protein pr... 29 4.6
BC012482-1|AAH12482.1| 552|Homo sapiens glucosamine (N-acetyl)-... 29 4.6
AY956760-1|AAX38247.1| 418|Homo sapiens heat shock protein 90Ad... 29 4.6
AK223484-1|BAD97204.1| 552|Homo sapiens glucosamine (N-acetyl)-... 29 4.6
BC112210-1|AAI12211.1| 474|Homo sapiens PRAME family member 10 ... 28 6.0
BC112208-1|AAI12209.1| 474|Homo sapiens PRAME family member 10 ... 28 6.0
AL049682-1|CAB41254.1| 459|Homo sapiens hypothetical protein pr... 28 6.0
AL022101-3|CAA17876.1| 459|Homo sapiens PRAME family member 10 ... 28 6.0
AF390562-1|AAN40840.1| 1826|Homo sapiens TBP-associated factor R... 28 6.0
BC040107-1|AAH40107.1| 115|Homo sapiens calcitonin gene-related... 28 8.0
>AK124875-1|BAC85976.1| 212|Homo sapiens protein ( Homo sapiens
cDNA FLJ42885 fis, clone BRHIP3007586. ).
Length = 212
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 2 ELYIPQERRITVSIFLRNNSYLAISHQPVVPKANFGQRPAHVPVQSPF 49
E IPQ + S + +LA S PV P+ G+R H+P + F
Sbjct: 101 EQSIPQPCHLPYSSLFHSFPFLAPSALPVFPECLRGERDPHLPKEMSF 148
>Z12173-1|CAA78164.1| 552|Homo sapiens
N-acetylglucosamine-6-sulphatase protein.
Length = 552
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 42 HVPVQSPFLWVFLKSRVYVNKLETLKNNIRHECENLSPEVLAEVLAEV 89
HVP+ + + K+ Y N ++ R EN S + L +VLA V
Sbjct: 164 HVPLGWSYWYALEKNSKYYNYTLSINGKARKHGENYSVDYLTDVLANV 211
>BX537363-1|CAD97608.1| 496|Homo sapiens hypothetical protein
protein.
Length = 496
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 42 HVPVQSPFLWVFLKSRVYVNKLETLKNNIRHECENLSPEVLAEVLAEV 89
HVP+ + + K+ Y N ++ R EN S + L +VLA V
Sbjct: 108 HVPLGWSYWYALEKNSKYYNYTLSINGKARKHGENYSVDYLTDVLANV 155
>BC012482-1|AAH12482.1| 552|Homo sapiens glucosamine
(N-acetyl)-6-sulfatase (Sanfilippo disease IIID)
protein.
Length = 552
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 42 HVPVQSPFLWVFLKSRVYVNKLETLKNNIRHECENLSPEVLAEVLAEV 89
HVP+ + + K+ Y N ++ R EN S + L +VLA V
Sbjct: 164 HVPLGWSYWYALEKNSKYYNYTLSINGKARKHGENYSVDYLTDVLANV 211
>AY956760-1|AAX38247.1| 418|Homo sapiens heat shock protein 90Ad
protein.
Length = 418
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 9 RRITVSIFLRNNSYLAISHQPVVPKANFGQRPAHVPVQSPFLWVFLKSRVYVNKLETLKN 68
R S+ + YLA+ H V + F + VP +PF + + + KL ++
Sbjct: 114 REFYKSLTINWEDYLAVKHFSVEGQLEF-RAFLFVPRLAPFELLETRKKKNKIKLSARRD 172
Query: 69 NIRHECENLSPEVL 82
I CE L PE L
Sbjct: 173 LIMDNCEELIPEYL 186
>AK223484-1|BAD97204.1| 552|Homo sapiens glucosamine
(N-acetyl)-6-sulfatase precursor variant protein.
Length = 552
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 42 HVPVQSPFLWVFLKSRVYVNKLETLKNNIRHECENLSPEVLAEVLAEV 89
HVP+ + + K+ Y N ++ R EN S + L +VLA V
Sbjct: 164 HVPLGWSYWYALEKNSKYYNYTLSINGKARKHGENYSVDYLTDVLANV 211
>BC112210-1|AAI12211.1| 474|Homo sapiens PRAME family member 10
protein.
Length = 474
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 38 QRPAHVPVQSPFLWVFLKSRVYVNKLETLKNNIRH 72
Q P + SPFL ++ +Y+ K+ +K ++ H
Sbjct: 252 QWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEH 286
>BC112208-1|AAI12209.1| 474|Homo sapiens PRAME family member 10
protein.
Length = 474
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 38 QRPAHVPVQSPFLWVFLKSRVYVNKLETLKNNIRH 72
Q P + SPFL ++ +Y+ K+ +K ++ H
Sbjct: 252 QWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEH 286
>AL049682-1|CAB41254.1| 459|Homo sapiens hypothetical protein
protein.
Length = 459
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 38 QRPAHVPVQSPFLWVFLKSRVYVNKLETLKNNIRH 72
Q P + SPFL ++ +Y+ K+ +K ++ H
Sbjct: 252 QWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEH 286
>AL022101-3|CAA17876.1| 459|Homo sapiens PRAME family member 10
protein.
Length = 459
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 38 QRPAHVPVQSPFLWVFLKSRVYVNKLETLKNNIRH 72
Q P + SPFL ++ +Y+ K+ +K ++ H
Sbjct: 252 QWPCIPDLDSPFLCLYYPQMLYIKKISNIKEHLEH 286
>AF390562-1|AAN40840.1| 1826|Homo sapiens TBP-associated factor RNA
polymerase 1-like protein.
Length = 1826
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 40 PAHVPVQSPFLWVFLKSRVYVNKLETLKNNIRHECENLSPEVLAEVLAEVMKNS 93
P H PV + + + K L+TL+ N+R +C S E E L ++KNS
Sbjct: 1423 PFHTPVNAKVVKDYYKIITRPMDLQTLRENVR-KCLYPSREEFREHLELIVKNS 1475
>BC040107-1|AAH40107.1| 115|Homo sapiens calcitonin gene-related
peptide-receptor component protein protein.
Length = 115
Score = 27.9 bits (59), Expect = 8.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Query: 60 VNKLETLKNNIRHECENLSPEVLAEVLAEVMKNSIKRARK 99
++ ETLK + C + SPE++ E L + + + +A K
Sbjct: 11 LSNYETLKYISKTPCRHQSPEIVREFLTALKSHKLTKAEK 50
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.322 0.135 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,610,099
Number of Sequences: 224733
Number of extensions: 614328
Number of successful extensions: 1122
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1112
Number of HSP's gapped (non-prelim): 13
length of query: 115
length of database: 73,234,838
effective HSP length: 80
effective length of query: 35
effective length of database: 55,256,198
effective search space: 1933966930
effective search space used: 1933966930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 59 (27.9 bits)
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