GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002579-TA|BGIBMGA002579-PA|undefined
         (115 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058706-1|AAL13935.1| 1556|Drosophila melanogaster LD43050p pro...    28   2.6  
AE014298-2605|AAF48759.2| 1556|Drosophila melanogaster CG32560-P...    28   2.6  
AY061380-1|AAL28928.1|  731|Drosophila melanogaster LD30319p pro...    28   3.4  
AE013599-1155|AAF58766.2|  731|Drosophila melanogaster CG16728-P...    28   3.4  
AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anem...    27   7.9  
AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-P...    27   7.9  

>AY058706-1|AAL13935.1| 1556|Drosophila melanogaster LD43050p
           protein.
          Length = 1556

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 54  LKSRVYVNKLETLKNNIRHECENLSPEVLAEVLAEVMKNSIKRARKAVNCDGARLADII 112
           L   VY N L  LK N +  CE L P V+     E +  ++     A    GA L D++
Sbjct: 419 LPINVYGNFLTYLKENYKRVCETLEP-VIGVKAKEDIGQALVLLMHAQGLAGAFLTDVV 476


>AE014298-2605|AAF48759.2| 1556|Drosophila melanogaster CG32560-PA
           protein.
          Length = 1556

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 54  LKSRVYVNKLETLKNNIRHECENLSPEVLAEVLAEVMKNSIKRARKAVNCDGARLADII 112
           L   VY N L  LK N +  CE L P V+     E +  ++     A    GA L D++
Sbjct: 419 LPINVYGNFLTYLKENYKRVCETLEP-VIGVKAKEDIGQALVLLMHAQGLAGAFLTDVV 476


>AY061380-1|AAL28928.1|  731|Drosophila melanogaster LD30319p
           protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 62  KLETLKNN-IRHECENLSPEVLAEVLAEVMKNSIK 95
           KL T +N  I+HECENL   + A+    + KN+++
Sbjct: 677 KLLTRQNILIQHECENLQKAIEADDKQAIQKNTLE 711


>AE013599-1155|AAF58766.2|  731|Drosophila melanogaster CG16728-PA
           protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)

Query: 62  KLETLKNN-IRHECENLSPEVLAEVLAEVMKNSIK 95
           KL T +N  I+HECENL   + A+    + KN+++
Sbjct: 677 KLLTRQNILIQHECENLQKAIEADDKQAIQKNTLE 711


>AJ459772-1|CAD30834.1| 1478|Drosophila melanogaster Fanconi anemia
           complementationgroup D2 protein protein.
          Length = 1478

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 42  HVPVQSPFLWVFLKSRVYVNKLETLKNNI 70
           HVP+ S    +F  +  Y +K+ET K  +
Sbjct: 113 HVPIVSKLREIFTSASSYTDKMETFKTGL 141


>AE014297-2866|AAN13836.2| 1478|Drosophila melanogaster CG17269-PA
           protein.
          Length = 1478

 Score = 26.6 bits (56), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 42  HVPVQSPFLWVFLKSRVYVNKLETLKNNI 70
           HVP+ S    +F  +  Y +K+ET K  +
Sbjct: 113 HVPIVSKLREIFTSASSYTDKMETFKTGL 141


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.322    0.135    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,367,361
Number of Sequences: 52641
Number of extensions: 199778
Number of successful extensions: 469
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 465
Number of HSP's gapped (non-prelim): 6
length of query: 115
length of database: 24,830,863
effective HSP length: 75
effective length of query: 40
effective length of database: 20,882,788
effective search space: 835311520
effective search space used: 835311520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 56 (26.6 bits)