GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002578-TA|BGIBMGA002578-PA|IPR002655|Acyl-CoA oxidase,
C-terminal, IPR012258|Acyl-CoA oxidase, IPR009075|Acyl-CoA
dehydrogenase/oxidase C-terminal
         (332 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          23   4.9  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   6.5  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   6.5  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   6.5  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   6.5  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   6.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   8.6  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 15/59 (25%), Positives = 28/59 (47%)

Query: 155 ERVAACKLSAAVSTRNQYLKSGLSPEESWNMTSVQLVAVSEAHCRALILSTYKAEVDRK 213
           +R+ +C L    S  + +LK  ++ +E W + +      S +  R    +T KA + RK
Sbjct: 7   QRINSCDLLKKRSENDPFLKRLITGDEKWVVYNNIKRKRSWSRPRESAQTTSKAGIHRK 65


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/35 (20%), Positives = 20/35 (57%)

Query: 155 ERVAACKLSAAVSTRNQYLKSGLSPEESWNMTSVQ 189
           +R+ +C L    +  + +LK  ++ +E W + +++
Sbjct: 7   QRINSCDLLKKRNENDPFLKRPITGDEKWVVNNIK 41


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 275 GLVDGFDFRDEILNSTLGAYDGRV 298
           G V+  +   E+L++ LG YD R+
Sbjct: 24  GKVNYREKEKEVLDNILGGYDARI 47


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)

Query: 275 GLVDGFDFRDEILNSTLGAYDGRV 298
           G V+  +   E+L++ LG YD R+
Sbjct: 24  GKVNYREKEKEVLDNILGGYDARI 47


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 299 YERLMEEALKSPLNAEPVNRSFHQY 323
           Y+R     + +PLN  P N+ F  +
Sbjct: 61  YQRYFTAFMDTPLNELPANKRFQAH 85


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 299 YERLMEEALKSPLNAEPVNRSFHQY 323
           Y+R     + +PLN  P N+ F  +
Sbjct: 61  YQRYFTAFMDTPLNELPANKRFQAH 85


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 10/37 (27%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 98  IYEGENTVLLLQTARSLVKAWEQNARGEKLSSTVSYI 134
           +YE +N  ++L TAR  +K W       ++S+ + ++
Sbjct: 196 VYENKNGSVILDTARCSMK-WTLIEHAFEISTMLFFV 231


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.131    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,071
Number of Sequences: 429
Number of extensions: 3224
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3
Number of HSP's gapped (non-prelim): 7
length of query: 332
length of database: 140,377
effective HSP length: 58
effective length of query: 274
effective length of database: 115,495
effective search space: 31645630
effective search space used: 31645630
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)