GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002577-TA|BGIBMGA002577-PA|IPR012258|Acyl-CoA oxidase,
IPR009100|Acyl-CoA dehydrogenase/oxidase, middle and N-terminal,
IPR009075|Acyl-CoA dehydrogenase/oxidase C-terminal,
IPR006091|Acyl-CoA dehydrogenase/oxidase, central region
         (294 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           26   1.1  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           26   1.1  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           26   1.1  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           26   1.1  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   5.9  

>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 74  KDNSPFSLHYSMFVPAIIAQANDEQKKYWLKRAMNTE-IIGTYAQTELGHGTFI 126
           KD+S  ++  ++ V +   + +    KYW+K   + E  +G   QT  G G  +
Sbjct: 124 KDSSGLAVSRAVLVRSCKEEPSKRTGKYWIKPTEHDEPFLGYCEQTSFGGGWLV 177


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 74  KDNSPFSLHYSMFVPAIIAQANDEQKKYWLKRAMNTE-IIGTYAQTELGHGTFI 126
           KD+S  ++  ++ V +   + +    KYW+K   + E  +G   QT  G G  +
Sbjct: 124 KDSSGLTVSRAVLVRSCKEEPSKRTGKYWIKPTEHDEPFLGYCEQTSFGGGWLV 177


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 74  KDNSPFSLHYSMFVPAIIAQANDEQKKYWLKRAMNTE-IIGTYAQTELGHGTFI 126
           KD+S  ++  ++ V +   + +    KYW+K   + E  +G   QT  G G  +
Sbjct: 124 KDSSGLAVSRAVLVRSCKEEPSKRTGKYWIKPTEHDEPFLGYCEQTSFGGGWLV 177


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 74  KDNSPFSLHYSMFVPAIIAQANDEQKKYWLKRAMNTE-IIGTYAQTELGHGTFI 126
           KD+S  ++  ++ V +   + +    KYW+K   + E  +G   QT  G G  +
Sbjct: 124 KDSSGLAVSRAVLVRSCKEEPSKRTGKYWIKPTEHDEPFLGYCEQTSFGGGWLV 177


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)

Query: 183 PFMVQLRDENTHMPL 197
           PFM+ +R+E T +PL
Sbjct: 387 PFMMLIREETTRLPL 401


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.133    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,419
Number of Sequences: 2123
Number of extensions: 10843
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 5
length of query: 294
length of database: 516,269
effective HSP length: 64
effective length of query: 230
effective length of database: 380,397
effective search space: 87491310
effective search space used: 87491310
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 48 (23.4 bits)