Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002576-TA|BGIBMGA002576-PA|IPR012258|Acyl-CoA oxidase,
IPR009100|Acyl-CoA dehydrogenase/oxidase, middle and N-terminal,
IPR009075|Acyl-CoA dehydrogenase/oxidase C-terminal,
IPR006091|Acyl-CoA dehydrogenase/oxidase, central region,
IPR002655|Acyl-CoA oxidase, C-terminal
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14) 228 1e-59
SB_27283| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 3e-51
SB_55185| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=4.5e-16) 140 2e-33
SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 3e-33
SB_27285| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 3e-18
SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 1e-08
SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-07
SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.002
SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.011
SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.044
SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23) 35 0.24
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 33 0.72
SB_35410| Best HMM Match : Mo-co_dimer (HMM E-Value=0) 32 1.7
SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.7
SB_46931| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.8
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.8
SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.8
SB_17094| Best HMM Match : NapE (HMM E-Value=7.7) 30 6.7
SB_42713| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.7
>SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14)
Length = 490
Score = 228 bits (557), Expect = 1e-59
Identities = 128/295 (43%), Positives = 177/295 (60%), Gaps = 30/295 (10%)
Query: 4 NEDLAKERARCDFNVSEITNILDGGIERTKQRKKIESIALSNGKCRDVTPEETLGPKERY 63
N D+A+ER++ F+V E+ N+LDGG + T++R+ +ES+ LS + L +E +
Sbjct: 2 NPDIARERSQASFSVQELINLLDGGKQNTERRRYVESL-LSQEPLFQKEQDFFLSREEAF 60
Query: 64 ENAIRKSCLYTKIVKDQVLT-------LTGLEVLGSNSSVLRR-TADAFFKDIS------ 109
+ +++ +IVK+ +T L+ ++ NS LR T + + +
Sbjct: 61 DLVGQRALRVFQIVKENKITSREDNRHLSRSTLMEENSVQLRAWTYEKLVRKMGKRTPAQ 120
Query: 110 -------------PFLLHLGMFVPTIMGQGTPEQQSYWLPRALDFQIIGTYAQTELGHGT 156
P LH MF+PTI GT EQQ WLP A QI+GT+AQTELGHGT
Sbjct: 121 NPGYGCWGIDLTLPSDLHRVMFMPTIKLMGTKEQQEKWLPLAEMHQILGTFAQTELGHGT 180
Query: 157 FIRGLETTATYDPDTEEFVIHNPRLTSYKWWAGGLGKTSNYCIVVAQLYTQGKCYGIHPF 216
F+RGLETTATYD T++FV+H+P LT+ KWW G LG ++NYCIVVA+L K YG+H F
Sbjct: 181 FVRGLETTATYDKQTQQFVLHSPSLTASKWWPGNLGHSTNYCIVVARLIIDDKEYGLHYF 240
Query: 217 IVQIRDEDTHVPLPGVRVGEIGPRMG--FNTADNGFLGFDHYRIPRNHMLMKNSQ 269
++Q RD TH PLPGV +GEIGP+ +N DNGFL DH R+PR MLM +Q
Sbjct: 241 LLQTRDLKTHQPLPGVTIGEIGPKTSRYYNVNDNGFLLLDHVRVPREQMLMGLAQ 295
>SB_27283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 200 bits (488), Expect = 3e-51
Identities = 111/261 (42%), Positives = 159/261 (60%), Gaps = 17/261 (6%)
Query: 189 GGLGKTSNYCIVVAQLYTQGKCYGIHPFIVQIRDEDTHVPLPGVRVGEIGPRMGF--NTA 246
G +G T ++ IV+AQLY K YGI F++QIRD T P PGV++G+IGP+ F N+
Sbjct: 166 GHVGHTCSHAIVLAQLYIGKKSYGIQFFMLQIRDPVTRRPTPGVKLGDIGPKGSFLINSQ 225
Query: 247 DNGFLGFDHYRIPRNHMLMKNSQVLKDGTYVKVASHS--KLTYGTMVFVRVMLVNEVAFN 304
+NG+L DH R+PR+HML ++V+ DGT+VK ++ K+ Y M++VR + + F
Sbjct: 226 ENGYLLLDHVRVPRDHMLSALAEVMADGTFVKSSNEDADKVLYSIMLYVRSTIPQDAYFI 285
Query: 305 LAKAATIAVR-------------EPEPQILDYVTQQHKLFVCIATAHALQLSSNWLWKTF 351
++A TIAVR + E QILDY TQQ KL +ATA+A + +S+ + +
Sbjct: 286 ASRAITIAVRYSAVRRQSELKPGQGELQILDYSTQQDKLLPSLATAYAYKFASDRIRIEY 345
Query: 352 SAVLADMRGGNTENLPELHALSSCLKALSTSDSAALIEQCRLACGGHGYMLSSNLPLLYS 411
G+ NLPELH L+S +KA +TS + L + CRL CGGHG+ + S L L++
Sbjct: 346 ERANTKWTTGDFSNLPELHVLTSAMKAYTTSGARLLADTCRLGCGGHGFSIFSLLTELFA 405
Query: 412 FVTATRTYEGDYTVLLLQTAR 432
+A TYEG+ TVL LQ AR
Sbjct: 406 VASAACTYEGENTVLYLQVAR 426
Score = 97.9 bits (233), Expect = 2e-20
Identities = 59/151 (39%), Positives = 86/151 (56%), Gaps = 11/151 (7%)
Query: 4 NEDLAKERARCDFNVSEITNILDGGIERTKQRKKIESIALSNGKCRDVTPEETLGPKERY 63
N D+A+ER++ F++ E+T LDGG E+T +R+ +ES+ LSN + + G + Y
Sbjct: 28 NPDIARERSKASFDIQELTYFLDGGKEKTSRRRYLESL-LSNDPVFEKDQDWFYGREGSY 86
Query: 64 ENAIRKSCLYTKIVKDQVLTLTGLEVLGSNSSVLRRTADAFFKDISPFLLHLGMFVPTIM 123
EN++RK + IV+ +T E+ VL R P LL+ MF+PTI
Sbjct: 87 ENSLRKGVHFIDIVRTHKIT-DKYEL-----QVLERAIGYPL----PTLLNDLMFIPTIK 136
Query: 124 GQGTPEQQSYWLPRALDFQIIGTYAQTELGH 154
GT QQ W+P A +QI+GTYAQTE+GH
Sbjct: 137 TLGTKRQQEKWIPLAKSYQILGTYAQTEMGH 167
>SB_55185| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=4.5e-16)
Length = 647
Score = 140 bits (340), Expect = 2e-33
Identities = 96/336 (28%), Positives = 159/336 (47%), Gaps = 23/336 (6%)
Query: 113 LHLGMFVPTIMGQGTPEQQSYWLPRALDFQIIGTYAQTELGHGTFIRGLETTATYDPDTE 172
+ +F T++ GT S L + +G + TELG+G +ETTATYD +T+
Sbjct: 139 VQFNLFGGTVLKLGTERHHSKLLKGIDSLEDVGCFGLTELGYGNNAVQMETTATYDNETQ 198
Query: 173 EFVIHNPRLTSYKWWAGGLGKTSNYCIVVAQLYTQGKCYGIHPFIVQIRDEDTHVPLPGV 232
EF+++ P + K+W +++ +V AQLY GK GIH +V IRD++ +PG
Sbjct: 199 EFIVNTPSTLAQKYWITNGACDAHHIVVFAQLYVNGKNEGIHGVLVPIRDKNLK-EMPGS 257
Query: 233 RVGEIGPRMGFNTADNGFLGFDHYRIPRNHMLMKNSQVLKDGTYVKVASHS----KLTYG 288
+ ++GP+MG N DN FD+ R+PR ++L S V DG Y V + LT
Sbjct: 258 SIHDMGPKMGLNGVDNAKFIFDNVRVPRENLLNLYSDVDADGNYTTVVDGNIRKRFLTVA 317
Query: 289 TMVFVRVMLVNEVAFNLAKAA-TIAVR------------EPEPQILDYVTQQHKLFVCIA 335
+ + + ++ ++KA TIA R + + IL Y QQ L +A
Sbjct: 318 DQLLSGRLCIASMSQGVSKACITIATRYSATRLTVGPEGKSDTPILKYQLQQLALMPLLA 377
Query: 336 TAHALQLSSNWLWKTFSAVLADMRGGNTENLPELHALSSCLKALSTSDSAALIEQCRLAC 395
+A + +++ ++ D G + N+ + + L ++A++ CR C
Sbjct: 378 KTYAYDFALSYVKDCWAFKAED--GSDHANIVTMCCVIKALTGWHVGEAASI---CRERC 432
Query: 396 GGHGYMLSSNLPLLYSFVTATRTYEGDYTVLLLQTA 431
GG GY+ + + A T EGD VL+ + A
Sbjct: 433 GGQGYLSCNRFGPAIGYAHAAMTAEGDNAVLMQKVA 468
>SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 140 bits (339), Expect = 3e-33
Identities = 131/521 (25%), Positives = 227/521 (43%), Gaps = 37/521 (7%)
Query: 113 LHLGMFVPTIMGQGTPEQQSYWLPRALDFQIIGTYAQTELGHGTFIRGLETTATYDPDTE 172
+ +F T++ GT S L Q +G + TELG+G +ETTA YD +T+
Sbjct: 160 VQFNLFGGTVLKLGTERHHSKLLKGIDSLQEVGCFGLTELGYGNNAVQMETTAVYDKETK 219
Query: 173 EFVIHNPRLTSYKWWAGGLGKTSNYCIVVAQLYTQGKCYGIHPFIVQIRDEDTHVPLPGV 232
EFV++ P + K+W +++ +V AQ Y G GIH +V IRD D HV PGV
Sbjct: 220 EFVVNTPSPLAQKYWITNGACHAHHIVVFAQTYVDGVNQGIHGVLVPIRDHDLHVK-PGV 278
Query: 233 RVGEIGPRMGFNTADNGFLGFDHYRIPRNHMLMKNSQVLKDGTYVKVASHS----KLTYG 288
R+ ++G +MG N DN FD+ +PR ++L S+V +DGTY S LT
Sbjct: 279 RIDDMGHKMGLNGVDNAKFYFDNVHVPRENLLNVYSEVEEDGTYTTSIEGSIRKRFLTVA 338
Query: 289 TMVFVRVMLVNEVAFNLAKA-ATIAVR------------EPEPQILDYVTQQHKLFVCIA 335
+ + + ++ +KA T+A+R + IL Y QQ L +A
Sbjct: 339 DQLLSGRLCIASMSQGASKAVCTVAIRYSATRLAVGPDGMSDTPILKYQLQQRALMPLLA 398
Query: 336 TAHALQLSSNWLWKTFSAVLADMRGGNTENLPELHALSSCLKALSTSDSAALIEQCRLAC 395
+AL + ++ ++ AD G+ + ++ + +KAL+ A R C
Sbjct: 399 MTYALDFALAYIKDRWAFQAAD---GSEHS--DVVIMCCVIKALTGWHIAKAASVGRERC 453
Query: 396 GGHGYMLSSNLPLLYSFVTATRTYEGDYTVLLLQTARFLIKAWEQAESGKPVTPTVSYME 455
GG GY+ + + ++ T EGD +VL+ + A + ++ + SY+
Sbjct: 454 GGQGYLSCNRFGSAIAGSHSSITAEGDNSVLMQKVASERLMKFKPSY----FQIAASYV- 508
Query: 456 EAVVGNKYKWNGSAEGIIKAAYYVAAGKISSSVASI-RKRMKNGKAFEDA-WELTGVQLV 513
+ + W + K + + + + + K +K GK A W LV
Sbjct: 509 PGFISRMFGWADLSS--TKYLHAILEAREQALFLDLGMKMIKAGKKGRYATWMYKEQDLV 566
Query: 514 -AAAETHCRAVICDVYRKETVRLTANSSPNVKTVMDQLNMLYLSHWALERTGDLLRYTST 572
AAA+ + + + + R ++P ++ ++ +L LYL + G L
Sbjct: 567 QAAAQAYGDRLTSECFN----RALGKANPGLQPILGKLYHLYLIDTIEKNLGYLTTSGLM 622
Query: 573 TEDDIISCQQRYEELLAAIRPNAVGLVDAFDFPDEILQSTL 613
+ + +L + P A+ L D+F DE+L + +
Sbjct: 623 SAWTGSGVNKVAADLCREVAPQALALCDSFGLTDEMLSAPI 663
>SB_27285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 91.1 bits (216), Expect = 3e-18
Identities = 50/135 (37%), Positives = 72/135 (53%), Gaps = 2/135 (1%)
Query: 503 DAWELTGVQLVAAAETHCRAVICDVYRKETVRLTANSSPNVKTVMDQLNMLYLSHWALER 562
D+W V LV A+ H +I + + +NSS + +V+ + LY + +E
Sbjct: 18 DSWNKNSVDLVRCAKAHSSYLIVQFFLDALSQ--SNSSREIASVLKSQSDLYALYGIVED 75
Query: 563 TGDLLRYTSTTEDDIISCQQRYEELLAAIRPNAVGLVDAFDFPDEILQSTLGAYDGRVYE 622
+G + T + I + + L IRP+AV LVDAFD+ D +L S LG YDG+VY+
Sbjct: 76 SGSFMECGVLTVNQIAMIRDQVYSLYQIIRPDAVALVDAFDYSDFVLNSALGRYDGQVYQ 135
Query: 623 RLMEEALKSPLNAEP 637
RL E A KSPLN P
Sbjct: 136 RLFELAQKSPLNKSP 150
>SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 58.8 bits (136), Expect = 1e-08
Identities = 27/49 (55%), Positives = 36/49 (73%)
Query: 593 PNAVGLVDAFDFPDEILQSTLGAYDGRVYERLMEEALKSPLNAEPVNRS 641
P+AV LVDAFD+ D +L S LG YDG+VY+RL E A KS LN + +++
Sbjct: 2 PDAVALVDAFDYSDFVLNSALGRYDGQVYQRLFELAQKSELNKKKSSKN 50
>SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 55.6 bits (128), Expect = 1e-07
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 317 EPQILDYVTQQHKLFVCIATAHALQLSSNWLWKTFSAV-LADMRGGNTENLPEL----HA 371
E +L+Y QQ +L +A +AL S + F + + M G N + EL HA
Sbjct: 16 EIPVLEYQMQQWRLIPLLAATYALSYFSRTFFLNFVELQIGIMMGENNDRQEELGREIHA 75
Query: 372 LSSCLKALSTSDSAALIEQCRLACGGHGYMLSSNL 406
LSS K L+ + I++CR ACGGHGY+ + +
Sbjct: 76 LSSASKPLAGFTARDAIQECREACGGHGYLAGATI 110
>SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 41.5 bits (93), Expect = 0.002
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 119 VPTIMGQGTPEQQSYWLPRALDFQIIGTYAQTELGHGTFIRGLETTATYDPDTEEFVIHN 178
+P I+ G EQ+ +L R + I+ Y TE G+ + G++T A D E+VI+
Sbjct: 210 MPVILA-GNEEQKKKYLGRMIKEPIMAAYCVTEPTAGSDVAGIKTRAEKKGD--EYVING 266
Query: 179 PRLTSYKWWAGGLGKTSNYCIVVAQLYTQGKC-YGIHPFIVQIRDEDTHVPLPGVRVGEI 237
++ W G +N+ V+A+ + G FIV D DT PGV G
Sbjct: 267 QKM-----WITN-GGVANWYFVLARTDSSASAGKGFTGFIV---DADT----PGVTPGRK 313
Query: 238 GPRMGFNTADNGFLGFDHYRIPRNHML 264
MG +D + F+ +P+ ++L
Sbjct: 314 EQNMGQRASDTRGITFEDVVVPKENVL 340
>SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 39.1 bits (87), Expect = 0.011
Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 32/244 (13%)
Query: 23 NILDGGIERTKQRKKIESIALSNGKCRDVTPEETLGPKERYENAIRKSCLYTKIVKDQVL 82
NI+ G + K E+ + CRD E +++ R K++ + L
Sbjct: 27 NIVRNGRAISSLAKLPETHEMLRKTCRDFADNELTPVAGKFDKEHRYPQEKVKMLGE--L 84
Query: 83 TLTGLEVLGS-NSSVLRRTADAF-FKDISPFLLHLGMFVPTIMGQGTPEQQSYWLPRALD 140
L G+EV S + L A A ++IS LG + ++ GT Q+ W+ L+
Sbjct: 85 GLLGVEVPESLGGTGLDAFAYAIAMEEISRGCASLGCIM-SVNNYGTDAQKEEWIKPFLN 143
Query: 141 FQIIGTYAQTELGHGTFIRGLETTATYDPDTEEFVIHNPRLTSYKWWAGGLGKTSNYCIV 200
+G +A +E +G+ +TTA D D +V++ + W G
Sbjct: 144 GDRVGCFALSEPDNGSDAGAAKTTAVLDGD--HYVLNGTK----AWITNG---------- 187
Query: 201 VAQLYTQGKCYGIHPFIVQIRDEDTHVPLPGVRVGEIGPRMGFNTADNGFLGFDHYRIPR 260
Y GI F+V P PG+ +G ++G +L F+ RIP+
Sbjct: 188 ----YESEAAVGISAFLVP-------KPTPGLTLGNKEDKLGIRATSTCYLVFEDCRIPK 236
Query: 261 NHML 264
++L
Sbjct: 237 ENLL 240
>SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 37.1 bits (82), Expect = 0.044
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 114 HLGMFVPTIMGQGTPEQQSYWLPRALDFQIIGTYAQTELGHGTFIRGLETTATYDPDTEE 173
H + + I G EQ+ +LP+ L + IG A +E G+ + ++ A D D +
Sbjct: 128 HSNLCINQIARNGNKEQKRKYLPKLLSGEHIGALAMSEANAGSDVVSMKLRA--DKDGDH 185
Query: 174 FVIHNPRLTSYKWWAGGLGKTSNYCIVVAQLYTQGKC--YGIHPFIVQIRDEDTHVPLPG 231
+V L +K W G ++ IV A+ K + I F+V+ +PG
Sbjct: 186 YV-----LNGHKMWITN-GPDADVLIVYAKTNPSSKKPEHAITTFLVE-------KGMPG 232
Query: 232 VRVGEIGPRMGFNTADNGFLGFDHYRIPRNHML 264
++G ++ L FD+ RIP +++
Sbjct: 233 FSTSPKLDKLGMRGSNTCELVFDNCRIPAENVM 265
>SB_59640| Best HMM Match : RasGEF (HMM E-Value=0.23)
Length = 299
Score = 34.7 bits (76), Expect = 0.24
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 64 ENAIRKSCLYTKIVKDQVLTLTGLEVLGSNSSVLRRTAD-----AFFKDISPFLLHLGMF 118
+ ++K+ + + D+++ L E S++ + AD A +KD++P LH+ +
Sbjct: 78 QQRLKKTKMQKLMFSDELIGLISDETNRYEQSIIGQKADREARLAKWKDVTPDELHMFLG 137
Query: 119 VPTIMG-QGTPEQQSYWLPRAL 139
V +MG P+Q YW AL
Sbjct: 138 VALVMGINSLPQQALYWSQNAL 159
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 33.1 bits (72), Expect = 0.72
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 339 ALQLSSNWLWKTFSAVLADMRGGNTENL-PELHALSSCLKALSTSDSAALIEQCRLACGG 397
+L+ SS ++ SA +A +L P++ S+C+ A+ST A ++E+ R+
Sbjct: 612 SLEESSMDTYEIVSATIATAHVSTLSHLGPDIAQKSNCITAVSTQGEARILEKSRIEILP 671
Query: 398 HGYMLSSNLPLLYSFVTATRTYEGDYTVLLLQTAR 432
G + S+ + + TAT + LLQ AR
Sbjct: 672 RGAISSATPTISSNSHTATVASLKNVKAKLLQGAR 706
>SB_35410| Best HMM Match : Mo-co_dimer (HMM E-Value=0)
Length = 141
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 455 EEAVVGNKYKWNGSAEGIIKAAYYVAAGKISSSVASIRKRMKNGKAFE-DAWELT 508
EE V + Y W+G GI++ + GK ++ + + GKA+ WELT
Sbjct: 33 EEEVTISGYAWSGGGRGIVRVDVSLDGGKTWNTASLDGVKQPYGKAWAWSLWELT 87
>SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 31.9 bits (69), Expect = 1.7
Identities = 46/230 (20%), Positives = 92/230 (40%), Gaps = 8/230 (3%)
Query: 208 GKCYGIHPFIVQIRDEDTHVPLPGVRVGEIGPRMGFNTADNGFLGFDHYRIPRNHMLMKN 267
GK Y D P+ + GE+ ++ + GF G + P M +K
Sbjct: 125 GKKYAAFCLTEPSSGSDAATPIKDPKTGEVKDKVTAFIVERGFGGVESGP-PEKKMGIKA 183
Query: 268 S---QVLKDGTYVKVASHSKLTYGTMVFVRVMLVNEVAFNLAKAATIAVREPEPQILDYV 324
S +V D V V + G V + ++N F +A A + ++ + +D+
Sbjct: 184 SNTAEVYFDNVPVPVENVLG-GEGNGFKVAMNILNNGRFGMAGALSGTMKGLIEKAVDFA 242
Query: 325 TQQHKLFVCIATAHALQ--LSSNWLWKTFSAVLADMRGGNTENLPELHALSSCLKALSTS 382
+ + I T A+Q ++ + + +A M N ++ + + + + S
Sbjct: 243 ANRTQFGAKIETFGAIQEKIARMAMLHYVTESMAYMISANMDSGATDFQVEAAISKVFAS 302
Query: 383 DSAALI-EQCRLACGGHGYMLSSNLPLLYSFVTATRTYEGDYTVLLLQTA 431
++A + ++C GG G+M S+ + + + R +EG +L L A
Sbjct: 303 EAAWFVADECIQILGGTGFMKSAGVERVMRDLRIFRIFEGTNDILRLMIA 352
>SB_46931| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 30.7 bits (66), Expect = 3.8
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 103 AFFKDISPFLLHLGMFVPTIMG-QGTPEQQSYWLPRAL 139
A +KD++P LH+ + V +MG P+Q YW AL
Sbjct: 9 AKWKDVTPDELHMFLGVALVMGINSLPQQALYWSQNAL 46
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 30.7 bits (66), Expect = 3.8
Identities = 20/76 (26%), Positives = 31/76 (40%)
Query: 428 LQTARFLIKAWEQAESGKPVTPTVSYMEEAVVGNKYKWNGSAEGIIKAAYYVAAGKISSS 487
L+ A L+ A + + SG VTP SY V G K G + G + + +S
Sbjct: 1645 LKDALKLLDASDASASGSGVTPPASYKTSIVSGEGEKKAGQSSGSVTKVILTPSASNDAS 1704
Query: 488 VASIRKRMKNGKAFED 503
+ + GK +D
Sbjct: 1705 GSKPPSKAAEGKGEDD 1720
>SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 30.7 bits (66), Expect = 3.8
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 31/145 (21%)
Query: 126 GTPEQQSYWLPRALDFQIIGTYAQTELG-HGTFIRGLETTATYDPDTEEFVIHNPRLTSY 184
G+PEQ+ WL L+ ++ + TE G + +E T D +VI N R
Sbjct: 138 GSPEQKKKWLDPLLNGEMRSAFCMTEPGVASSDATNMECKITRHGD--HYVI-NGR---- 190
Query: 185 KWWAGGLGKTSNYCIVVAQLYTQGKCYGIHPFIVQIRDEDTHVPLPGVRVGEIGPRMGFN 244
KWW+ G G C ++ + T G ++D +H RV P F
Sbjct: 191 KWWSSGAGDPR--CKILIVMGTSG-----------VKDAPSHAS----RVISDAPHGHFE 233
Query: 245 TADNGFLGFDHYRIPRNHMLMKNSQ 269
A FDH R+P +M++ +Q
Sbjct: 234 MA------FDHVRVPACNMILGLAQ 252
>SB_17094| Best HMM Match : NapE (HMM E-Value=7.7)
Length = 219
Score = 29.9 bits (64), Expect = 6.7
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 595 AVGLVDAFDFPDEILQSTLGAYDGRVYERLMEEALKSPLNAEPVNRSF 642
AVGL F ++L+S G G ++ + L+ PLNA NR F
Sbjct: 161 AVGLFWGFHILYQVLRSQKGVVGGNLFLNEIYFTLRQPLNALENNRGF 208
>SB_42713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.9 bits (64), Expect = 6.7
Identities = 20/72 (27%), Positives = 32/72 (44%)
Query: 37 KIESIALSNGKCRDVTPEETLGPKERYENAIRKSCLYTKIVKDQVLTLTGLEVLGSNSSV 96
K S+ +NG R E+ + +R +RK+ T + KD+ + LG + V
Sbjct: 30 KKPSVIPANGATRIKELEDQVSDLKRRLGELRKAKSQTIVKKDKEYVTSDAPQLGQKTGV 89
Query: 97 LRRTADAFFKDI 108
L DA+ K I
Sbjct: 90 LSHDLDAYKKQI 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,520,326
Number of Sequences: 59808
Number of extensions: 889657
Number of successful extensions: 1815
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1785
Number of HSP's gapped (non-prelim): 28
length of query: 654
length of database: 16,821,457
effective HSP length: 87
effective length of query: 567
effective length of database: 11,618,161
effective search space: 6587497287
effective search space used: 6587497287
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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