Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002575-TA|BGIBMGA002575-PA|IPR012258|Acyl-CoA oxidase,
IPR009100|Acyl-CoA dehydrogenase/oxidase, middle and N-terminal,
IPR009075|Acyl-CoA dehydrogenase/oxidase C-terminal,
IPR006091|Acyl-CoA dehydrogenase/oxidase, central region,
IPR002655|Acyl-CoA oxidase, C-terminal
(665 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22... 442 e-124
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010... 224 2e-58
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478... 200 3e-51
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 42 0.001
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 33 0.55
11_01_0354 + 2665570-2665601,2665796-2665894,2667158-2667202,266... 32 1.3
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 32 1.3
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 32 1.7
08_02_0903 + 22438406-22438614,22439640-22440366,22440494-224406... 31 2.9
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 30 5.1
04_03_0882 + 20535238-20535269,20535406-20535486,20535847-205359... 30 5.1
01_06_1336 + 36396904-36397014,36397141-36397191,36397681-363977... 30 5.1
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 30 6.8
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 30 6.8
04_04_0682 - 27229936-27231087,27231954-27232337 30 6.8
03_06_0594 + 34950892-34951167,34952241-34952366,34952707-349530... 30 6.8
>06_01_0023 +
227014-227166,227893-228001,228096-228157,228284-228493,
228609-228696,228774-228936,229037-229235,229456-229653,
229887-230018,230182-230302,230453-230563,230710-230779,
230880-231063,231137-231346
Length = 669
Score = 442 bits (1088), Expect = e-124
Identities = 254/671 (37%), Positives = 373/671 (55%), Gaps = 31/671 (4%)
Query: 8 LVKERQKCTFDVQELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENA 67
L ER FDV+ + G H ++ + +++ + + L KE +++
Sbjct: 12 LAGERATAQFDVEHM-KVAWAGSRHAVDVADRMARLVASDPVFRKDNRTMLPRKELFKDT 70
Query: 68 IRKASLLFKILQKYFETHNLLDIFSPTNKYRVQFGVLKDVSPFLVHMGMFLPTLLHQTTP 127
+RKA+ +K + + T ++ Y Q G + +H GMF+P + Q T
Sbjct: 71 LRKAAHAWKRIVELRLTEEEANLL---RLYVDQPGYVD------LHWGMFVPAIKGQGTE 121
Query: 128 EQAAEWVPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDAKAEEFILNTPTLTSFKWWP 187
EQ +W+P A Q+IG YAQTELGHG+ ++GLETTAT+D K +EF++++PTLTS KWWP
Sbjct: 122 EQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWP 181
Query: 188 GGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHMPMPGIKIGEIGSKLG---YNT 244
GGL + H VV A+L T+GK YG+H F+VQ+R LE H P+PG+ +G+IG K G YN+
Sbjct: 182 GGLGKASTHAVVYARLITEGKDYGIHGFIVQLRSLEDHSPLPGVTLGDIGGKFGSGAYNS 241
Query: 245 VNNGFLGFNKVRIPRTNLLMKNAQVLKDGTYVKAKSEK-LTYGTMVLIRVLIVTDMAYEL 303
++NG L F+ VRIPR +LM+ +QV K+G YV + K L YGTMV +R IV D + L
Sbjct: 242 MDNGVLRFDHVRIPRDQMLMRLSQVTKEGKYVHSDVPKQLLYGTMVFVRQTIVADASKAL 301
Query: 304 ARASTVAVRYSVVRHQSQPKPGQPEPQIIEYVTQQHKLFIAVATSHVYRITGHWLWDTYY 363
+RA+ +AVRYS +R Q P+ G PE Q++ Y TQQ +LF +A+++ +R G WL Y
Sbjct: 302 SRATCIAVRYSAIRKQFGPQTGGPETQVLNYKTQQSRLFPLLASAYAFRFVGEWLKWLYT 361
Query: 364 KVTSDLDKGNLEQLPELHAVSCCLKAVCSRDASIHIDDCRLACGGHGYMKSSSFPFIQAI 423
VT L+ + L E HA + LKAV + + I++CR CGGHGY+ SS P + AI
Sbjct: 362 DVTHKLEAKDFSTLQEAHACTAGLKAVTTSATADGIEECRKLCGGHGYLNSSGLPELFAI 421
Query: 424 VTASVTYEGEYTVMMLQTARYLMKTLKQALSGKAITSTVAYLLDFD--------KNSNRN 475
+ TYEG+ V++LQ AR+LMKT+ Q SGK T AY+ + N+ +
Sbjct: 422 YVPACTYEGDNVVLLLQVARFLMKTVSQLASGKQPVGTTAYMGNIQYLMQCKCGVNTAED 481
Query: 476 WQNTPEGIVIGFQAIAAGLTKAAYDEIEKHEKTGLDYEDSWNQASVQLVRASEAHCRVII 535
W N P I F+A A + I K E+ + + S L+ + AH ++II
Sbjct: 482 WLN-PAAIREVFEARALRMAVNCAQNINK----APSQEEGFYELSPDLLEVAVAHIQLII 536
Query: 536 CEKSWLEAQRLTKSL-SPALSKVLLELVELYIIYWALEKKGDFLVYTKMQKDDVMQLQQR 594
K ++L + + + + L L +Y +Y + GDFL + ++
Sbjct: 537 VTKF---IEKLEQDIPGEGVKEQLCILCNVYALYLVHKHLGDFLSTGSITARQGALANEQ 593
Query: 595 YEELLAVIRPNAVGLVDGFDIRDEILNSTLGAYDGRVYERLMEEALKSPLNAEPVNTSFH 654
+L A +RPNAV LVD F+ D L S LG YDG VY L EEA K PLN V +
Sbjct: 594 LGKLYAQVRPNAVALVDAFNYTDHYLGSVLGRYDGNVYPALYEEAWKDPLNDTDVPDGYQ 653
Query: 655 QYLKPFMTAKL 665
++L+P + +L
Sbjct: 654 EHLRPLLKQQL 664
>11_06_0340 -
22500411-22500566,22500660-22500783,22500914-22501080,
22501157-22501336,22501544-22502427,22502728-22502843,
22503745-22504217
Length = 699
Score = 224 bits (547), Expect = 2e-58
Identities = 163/508 (32%), Positives = 257/508 (50%), Gaps = 36/508 (7%)
Query: 144 GTYAQTELGHGTFLRGLETTATYDAKAEEFILNTPTLTSFKWWPGGLAHTANHCVVVAQL 203
G +A TEL HG+ ++ L+TTAT+D +EFI+NTP + KWW G A V A+L
Sbjct: 187 GCFAMTELHHGSNVQALQTTATFDPVTDEFIINTPNDGAIKWWIGNAALHGKFATVFARL 246
Query: 204 YT--KGKC-----YGVHPFLVQIRDLETHMPMPGIKIGEIGSKLGYNTVNNGFLGFNKVR 256
+GK G+H F+V IRDL+T+ +PGI+I + G K+G N V+NG L F VR
Sbjct: 247 ILPLQGKGGDPADMGIHAFIVPIRDLDTNAVLPGIEINDCGHKIGLNGVDNGALRFRSVR 306
Query: 257 IPRTNLLMKNAQVLKDGTYVKA-----KSEKLTYGTMVLIRVLIVTDMAYELARASTVAV 311
IPR NLL + V +DG Y + K T G +V RV I L + T+AV
Sbjct: 307 IPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGIAYSSVGILKVSVTIAV 366
Query: 312 RYSVVRHQSQPKPGQPEPQIIEYVTQQHKLFIAVATSHVYRITGHWLWDTYYKVTSDLDK 371
RY+++R Q P P +PE +++Y + QHKL +A+S+ + +L D Y S++ K
Sbjct: 367 RYALLRQQFGP-PKKPEISVLDYQSHQHKLMPMLASSYAFHFATRYLVDKY----SEMKK 421
Query: 372 GNLEQ-LPELHAVSCCLKAVCSRDASIHIDDCRLACGGHGYMKSSSFPFIQAIVTASVTY 430
N E + ++H +S LKA + + I CR +CGGHGY + F ++ T+
Sbjct: 422 TNDEDVMADVHVLSSGLKAYITSYTAKSISVCRESCGGHGYAAVNRFGALRNDHDIFQTF 481
Query: 431 EGEYTVMMLQTARYLMKTLKQALSGKAITSTVAYLLD----FDKNSN---RNWQ-----N 478
EG+ TV++ Q A L+K ++ G +++T YL D + N W+
Sbjct: 482 EGDNTVLLQQVAGDLLKQYQEKFKGGTLSATWNYLRDSMGTYLSQPNPVTSRWEGEDHLR 541
Query: 479 TPEGIVIGFQAIAAGLTKAAYDEIEKHEKTGLDYEDSWNQASVQLVRASEAHCRVIICEK 538
P + F+ + L + ++KH KT L +WN+ L+ +E+H +I K
Sbjct: 542 DPNFQLDAFRYRTSRLLHSVAARLQKHSKT-LGGFGAWNRCLNHLLTLAESHIESVILAK 600
Query: 539 SWLEAQRLTKSLSPALSKVLLELV-ELYIIYWALEKKGDFLVYTKMQKDDVMQLQQRYEE 597
++EA K ++ LL+LV +LY + + G + + + + + +
Sbjct: 601 -FIEA---VKRCPDEKTRELLKLVCDLYALDRIWKDIGTYRNVDYVAPNKAKAIHKLADY 656
Query: 598 LLAVIRPNAVGLVDGFDIRDEILNSTLG 625
L +R A LVD FD+ D I+ + +G
Sbjct: 657 LSYQVRLVAQELVDAFDLPDLIIRAPIG 684
>06_02_0320 -
14347195-14347443,14347573-14347674,14347747-14347851,
14347938-14348084,14348171-14348290,14348743-14348878,
14349198-14349328,14350854-14350928,14351040-14351139,
14351213-14351385,14351474-14351581,14351674-14351791,
14353477-14353970
Length = 685
Score = 200 bits (488), Expect = 3e-51
Identities = 115/339 (33%), Positives = 175/339 (51%), Gaps = 13/339 (3%)
Query: 112 VHMGMFLPTLLHQTTPEQAAEWVPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDAKAE 171
VH ++ + T +W+ ++ + G ++ TELGHG+ +RG+ET ATYD K
Sbjct: 160 VHFFLWGSAIKFLGTKRHHDKWLSDTENYVIKGCFSMTELGHGSNVRGIETVATYDIKTR 219
Query: 172 EFILNTPTLTSFKWWPGGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHMPMPGI 231
EF++NTP ++ K+W GG A+ A H +V AQL+ G+ GVH F+ QIRD E MP I
Sbjct: 220 EFVINTPCESAQKYWIGGAANHATHTIVFAQLHINGRNEGVHAFVAQIRD-EHENVMPNI 278
Query: 232 KIGEIGSKLGYNTVNNGFLGFNKVRIPRTNLLMKNAQVLKDGTYVKAKSE-----KLTYG 286
+I + G K+G N V+NG + FN +R+PR NLL A VL DG YV +
Sbjct: 279 QIADCGHKIGLNGVDNGRIWFNNIRVPRENLLNLVADVLPDGQYVSTIDDPDQRFAAFLS 338
Query: 287 TMVLIRVLIVTDMAYELARASTVAVRYSVVRHQSQPKPGQPEPQIIEYVTQQHKLFIAVA 346
+ L RV I + Y +AVRY++ R P PE +++Y + Q +L +A
Sbjct: 339 PLTLGRVNIAVNAVYISKVGVAIAVRYALSRRAFSVTPDGPEMLLLDYPSHQRRLLPLLA 398
Query: 347 TSHVYRITGHWLWDTYYKVTSDLDKGNLEQLPELHAVSCCLKAVCSRDASIHIDDCRLAC 406
+ + G+++ Y K T +L+K +H S LKA + + +CR AC
Sbjct: 399 KACLMSSAGNFMKRMYVKRTPELNK-------SIHIYSSALKATLTWQNMTTLQECREAC 451
Query: 407 GGHGYMKSSSFPFIQAIVTASVTYEGEYTVMMLQTARYL 445
GG G + +A T+EG+ V+M Q ++ L
Sbjct: 452 GGQGLKTENRIGIFKAEFDVQSTFEGDNNVLMQQVSKAL 490
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 42.3 bits (95), Expect = 0.001
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 111 LVHMGMFLPTLLHQTTPEQAAEWVPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDAKA 170
LVH + + T+ + Q +++P + +G +A TE HG+ L TTAT
Sbjct: 132 LVHSSLAMVTIALCGSEVQKQKYLPSLAQLTAVGCWALTEPNHGSDASSLITTATK---- 187
Query: 171 EEFILNTPTLTSFKWWPGGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHMPMPG 230
+ + K W G A+ VV+A+ + G F+V+ PG
Sbjct: 188 ---VPGGWHIDGQKRWIGNSTF-ADVLVVLARNANTKQLNG---FIVR-------KGAPG 233
Query: 231 IKIGEIGSKLGYNTVNNGFLGFNKVRIPRTNLL 263
+K +I +K+G V NG + FNKV +P + L
Sbjct: 234 LKATKIENKIGLRMVQNGDIVFNKVFVPEEDRL 266
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 33.5 bits (73), Expect = 0.55
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 1 MSSVNPDLVKERQKCTFDVQEL----VHFIDRGEEHTLERKELEDLVLSV-KELKDETPE 55
+S DL K+RQK + ++L H + ++ E+K LE + K LKD E
Sbjct: 494 LSEETEDLRKQRQKFEEEWEQLDEKRTHLEEEAKKLNNEKKNLERWHDNEEKRLKDREDE 553
Query: 56 EYLSHKERYEN-AIRKASLLFKILQKYFETHNLL 88
+ +KE+ EN A+++ SL+ I + E LL
Sbjct: 554 LDIKYKEQGENLALKEKSLIDNIDHQRLENEELL 587
>11_01_0354 +
2665570-2665601,2665796-2665894,2667158-2667202,
2667293-2667356,2667497-2667709,2669960-2670160
Length = 217
Score = 32.3 bits (70), Expect = 1.3
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 565 YIIYWALEKKGDFLVYTKMQKDDVMQLQQRYEELLAVIRPNAVGLVDGFDIRDEILNSTL 624
++ W + KG +VY + VMQ + E+ L +R N+ G + F I++ T
Sbjct: 71 FVYLWYPKTKGSDVVYDSFIRPTVMQYEPNIEQRLEHLRANS-GQLIAFYIKNFADKGTA 129
Query: 625 GAYDGRVYERLMEEALKSPLNAEPVNTSFHQYLKPFMTAK 664
D Y ++ E ++ N+EP +S+ + PF + +
Sbjct: 130 FFMDFLRY--VVSERPEAAANSEPQRSSWSSW-NPFASRR 166
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 32.3 bits (70), Expect = 1.3
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 533 VIICEKSW---LEAQRLTKSLSPALSKVLLELVELYIIYWALE-KKGDFLVYTKMQKDDV 588
+ I K W L + + ++ L + L+ V+LY+I+W + KKG L K D+
Sbjct: 74 LFITSKIWCSDLAPEDVPLAMDSTLKDLQLDYVDLYLIHWPFQIKKGTELSPENFVKPDI 133
Query: 589 MQLQQRYEELLAVIRPNAVGL 609
+ E+L + A+G+
Sbjct: 134 PSTWRAMEQLYDSGKARAIGV 154
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 31.9 bits (69), Expect = 1.7
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 4 VNPDLVKERQKCTFDVQ--ELVH--FIDRGEEHTLERKELEDLVLSVKELKDETPEEYLS 59
VN DL+K K ++ ELV+ +D+ H K +ED +++ E P+
Sbjct: 200 VNLDLIKVEGKVGGKLEDTELVYGIIVDKDMSHPQMPKRIEDAKIAILTCPFEPPKPKTK 259
Query: 60 HKERYENAIRKASLLFKILQKYFE 83
HK + + K +L + QKYF+
Sbjct: 260 HKVDID-TVEKFQMLREQEQKYFD 282
>08_02_0903 +
22438406-22438614,22439640-22440366,22440494-22440679,
22441310-22441770,22441869-22442027,22442098-22442449,
22442563-22442842,22443330-22443661
Length = 901
Score = 31.1 bits (67), Expect = 2.9
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 203 LYTKGKCYGVHPFLVQIRDLETHM 226
L+T C G+HPF VQIR E H+
Sbjct: 585 LHTVIMCEGIHPFEVQIRTKEMHL 608
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 30.3 bits (65), Expect = 5.1
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 493 GLTKAAYDEIEKHEKTGLDY--EDSWNQASVQLVRASEAHCR--VIICEKSWL---EAQR 545
G AA + +H T Y E +A R CR V + K W
Sbjct: 48 GALLAALEVGYRHIDTASVYGSERVVGEAVAGAARRGVIACREEVFVTTKVWCTQCHPDL 107
Query: 546 LTKSLSPALSKVLLELVELYIIYWALEKKGDFLVYTKMQKDDVMQLQQR 594
+ SL +L + +E V++Y+++W + K Y M+++D+M + R
Sbjct: 108 VLPSLRESLQNLQMEYVDMYLVHWPMSVKPTKPHY-PMKREDIMPMDLR 155
>04_03_0882 +
20535238-20535269,20535406-20535486,20535847-20535903,
20535991-20536054,20536326-20536532,20536838-20536891,
20536933-20537052
Length = 204
Score = 30.3 bits (65), Expect = 5.1
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 560 ELVELYIIY-WALEKKGDFLVYTKMQKDDVMQLQQRYEELLAVIRPNA 606
EL +++Y W + +G +VY + VMQ Q EE L +R NA
Sbjct: 63 ELRLAFLVYLWYPQTRGTDIVYDTFLRPLVMQYQPNIEERLRYLRANA 110
>01_06_1336 +
36396904-36397014,36397141-36397191,36397681-36397757,
36397876-36397963,36398616-36398891,36399002-36399250,
36400315-36400398
Length = 311
Score = 30.3 bits (65), Expect = 5.1
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 17/115 (14%)
Query: 476 WQNTPEGIVIGFQAIAAGLTKAAYDEIEKHEKTGLDYEDSWNQASVQLVRASEAHC---- 531
WQ+ P V+G AA KA Y +H Y++ N+ + L + E
Sbjct: 21 WQSDPG--VVGDAVYAA--VKAGY----RHIDCARMYKNE-NEVGIALKKLFEEGVVKRE 71
Query: 532 RVIICEKSWLEA---QRLTKSLSPALSKVLLELVELYIIYWALE-KKGDFLVYTK 582
+ I K W + + + +SL LS + LE ++LY+I+W KKG + T+
Sbjct: 72 DLFITSKLWCDCHAPEDVPESLDKTLSDLQLEYLDLYLIHWPFRVKKGSGISNTE 126
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 29.9 bits (64), Expect = 6.8
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 35 ERKELEDLVLSVKELKDETPEEYLSHKERYENAIRKASLLFKILQKYFETHNLLDIFSPT 94
E+++LED ++ K+E + + K+R E R+ + ++L+ ++ D+ S
Sbjct: 613 EQRQLEDEAAKIRRKKEEITDTMMFEKKRQEETRRRVDIKRRMLETIYKEE---DMESSK 669
Query: 95 NKYRVQFGVLKD 106
K+ Q L D
Sbjct: 670 RKFVDQAAKLND 681
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 29.9 bits (64), Expect = 6.8
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 26 IDRGEEHTLERKELEDLVLSVKELK-DETPEEYLSHKERYENAIRKA 71
I R + + L ++LE KE+K +ETPEE+ S ++R + A+ A
Sbjct: 213 IQRYKVNLLSNEDLESSSGKDKEVKQEETPEEFKSLQDRIDYAVHNA 259
>04_04_0682 - 27229936-27231087,27231954-27232337
Length = 511
Score = 29.9 bits (64), Expect = 6.8
Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 452 ALSGKAITSTVAY-LLDFDKNSNRNWQNTPEGIVIGFQAIAAGLTKAAYDEIEKHEKTGL 510
A +GK + +Y LD+++ + W + I +G G T A+DE E+
Sbjct: 50 AAAGKQVAKVHSYGALDYERRAALRWSSLYRRIAVGHGGRPVGRTLGAWDEGERR----- 104
Query: 511 DYEDSWNQASVQLVRASEAHCRVIICEKSWLEAQRLTKSLSPALSKVLLELV 562
D W + + + W+ +R SLS + + L+L+
Sbjct: 105 --LDKWELCRIARELRKFRRFNLALQVYDWMTERRDRFSLSSSDMAIQLDLI 154
>03_06_0594 +
34950892-34951167,34952241-34952366,34952707-34953018,
34954005-34954133,34954259-34954660
Length = 414
Score = 29.9 bits (64), Expect = 6.8
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 423 IVTASVTYEGEYTVMMLQTARYLMKTLKQALSGKAITSTVAYLLDFDKNSNRNWQNT--P 480
++ SVT G M YLM +++ + G+A + +DF ++ R + T
Sbjct: 253 VIPESVTLGGTLRSMTTDGLSYLMNRIREVIEGQAAVNRCTAAVDFMEDKLRPYPATVND 312
Query: 481 EGIVIGFQAIAAGL 494
EG+ +A+A +
Sbjct: 313 EGMYAHAKAVAESM 326
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.134 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,541,487
Number of Sequences: 37544
Number of extensions: 766068
Number of successful extensions: 1769
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1749
Number of HSP's gapped (non-prelim): 18
length of query: 665
length of database: 14,793,348
effective HSP length: 87
effective length of query: 578
effective length of database: 11,527,020
effective search space: 6662617560
effective search space used: 6662617560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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